Halarchaeum sp. CBA1220: EFA46_005530
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Entry
EFA46_005530 CDS
T06674
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EFA46_005530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_005530
DNA repair and recombination proteins [BR:
halr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EFA46_005530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
MutS_V
DUF7409
AAA_28
AAA_21
IMS_HHH
AAA_14
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLC33681
UniProt:
A0A7D5E5P2
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Position
1031422..1033131
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AA seq
569 aa
AA seq
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MESDLQDYWGVGPKTAARLTEALGEADAVRAIESADVSALVDAGVSPGRATRILRRATGG
GDAERFATDDARDVYKRVLETAAEFALTRRARDRIRVLTPLADADAREARLDAVFDAVET
WRELDEREREAAIAAFEEHDSRDGGERAAVETALALVDAGLDSGAFAAFADIDADALRDA
ADALRYRDGDGVRDGYDDRLDDLRERAAAVERLERDALGVLEDVRSGDLRGPDEFREAVV
EHVADVTGVGPARIREHAATDAADAADFVSGTLRSLADALRADAASREDSVRADLDSAVA
EADADVEAATEAVPDVAFTVSLARFAVAYDLTRPAYTDDAALAVAGARNLGLRASGASVQ
PVTYALGDHDLAGPPVGDRVAVLTGANSGGKTTLLETLAEVATLAVLGLPVPADHAVVGR
FDRLVFHRRHASFNAGVLETTLRSVVPPLARDGRTLMLVDEFEAITEPGSAADLLHGLVS
LTADHDALGVYVTHLADDLDPLPGRARVDGVFAEGLSPDLALEVDYQPRFGVVGRSTPEF
IVERLVANADDDAERDAFETLQGVVGDAE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacctacaggactactggggcgtcggcccgaagaccgccgcccgcctcacc
gaggcgctcggcgaggccgacgcggtccgcgccatcgagtccgccgacgtctccgcgctc
gtcgacgccggcgtctcgccgggtcgagccacccgcatcctccggcgcgccaccggtggt
ggcgacgccgagcgcttcgcgaccgacgacgcccgcgacgtctacaagcgcgtcctcgag
acggccgccgagttcgcgctcacgcgccgcgcccgcgaccgcatccgcgttctcacgccg
ctcgcggacgccgacgcgcgcgaagcccgcctcgacgcggtcttcgacgccgtcgagacg
tggcgcgagctcgacgagcgcgagcgcgaggccgccatcgccgccttcgaggagcacgac
agccgcgacggcggggagcgcgcggccgtcgaaaccgcgctcgcgctcgtcgacgccggc
ctcgactcgggggcgttcgcggcgttcgccgacatcgacgccgacgccctccgggacgcc
gccgacgccctgcgctatcgcgacggcgacggcgtccgcgacggctacgacgaccgcctc
gacgacctccgcgagcgcgcggccgccgtcgagcgcctcgaacgcgacgccctcggcgtg
ctcgaggacgtccgctcgggcgacctccgcggcccggacgagttccgcgaagccgtcgtc
gagcacgtcgcggacgtcacgggcgtcggccccgcgcgcatccgcgagcacgccgcgacc
gacgccgccgacgccgccgacttcgtgagcgggacgctccgctcgctcgccgacgccctc
cgcgcggacgccgcgagccgcgaggactcggtgcgcgcggacctcgacagcgccgtcgcc
gaggccgacgccgacgtcgaggccgcgaccgaggcggtccccgacgtggcgttcaccgtc
tcgctcgcgcgcttcgccgtcgcctacgacctcacgcgacccgcgtacaccgacgacgcc
gcgctcgcggtcgcgggcgcgcgcaacctcggtctccgcgcgtccggcgcgagcgtccaa
cccgtgacgtacgcgctcggcgaccacgacctcgcggggccgccggtcggcgaccgcgtc
gccgtcctcacgggcgcgaactccggcgggaagacgacgctcctcgagacgctcgccgaa
gtcgcgacgctcgccgtcctcgggcttcccgtccccgccgaccacgccgtcgtcgggcgg
ttcgaccgcctcgtcttccaccgccggcacgcgagcttcaacgccggcgtcctcgagacg
acgcttcgctccgtcgtgccgccgctcgcccgcgacggccgcacgctcatgctcgtcgac
gagttcgaggccatcaccgaacccgggagcgccgccgacctcctccacgggttggtctcg
ctcaccgccgaccacgacgcgctcggcgtctacgtcacccacctcgcggacgacctcgac
ccgctcccgggacgcgcgcgcgtcgacggcgtcttcgccgaagggctctccccggacctc
gccctcgaagtcgactaccagccccgcttcggcgtcgtcgggcgcagcacgcccgagttc
atcgtcgagcgcctcgtcgcgaacgccgacgacgacgccgagcgcgacgccttcgagacc
ctgcagggcgtcgtcggcgacgccgagtaa
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