KEGG   Halarchaeum sp. CBA1220: EFA46_005530
Entry
EFA46_005530      CDS       T06674                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
halr  Halarchaeum sp. CBA1220
Pathway
halr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EFA46_005530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halr03400]
    EFA46_005530
DNA repair and recombination proteins [BR:halr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     EFA46_005530
SSDB
Motif
Pfam: HHH_5 MutS_V DUF7409 AAA_28 AAA_21 IMS_HHH AAA_14 AAA_22
Other DBs
NCBI-ProteinID: QLC33681
UniProt: A0A7D5E5P2
LinkDB
Position
1031422..1033131
AA seq 569 aa
MESDLQDYWGVGPKTAARLTEALGEADAVRAIESADVSALVDAGVSPGRATRILRRATGG
GDAERFATDDARDVYKRVLETAAEFALTRRARDRIRVLTPLADADAREARLDAVFDAVET
WRELDEREREAAIAAFEEHDSRDGGERAAVETALALVDAGLDSGAFAAFADIDADALRDA
ADALRYRDGDGVRDGYDDRLDDLRERAAAVERLERDALGVLEDVRSGDLRGPDEFREAVV
EHVADVTGVGPARIREHAATDAADAADFVSGTLRSLADALRADAASREDSVRADLDSAVA
EADADVEAATEAVPDVAFTVSLARFAVAYDLTRPAYTDDAALAVAGARNLGLRASGASVQ
PVTYALGDHDLAGPPVGDRVAVLTGANSGGKTTLLETLAEVATLAVLGLPVPADHAVVGR
FDRLVFHRRHASFNAGVLETTLRSVVPPLARDGRTLMLVDEFEAITEPGSAADLLHGLVS
LTADHDALGVYVTHLADDLDPLPGRARVDGVFAEGLSPDLALEVDYQPRFGVVGRSTPEF
IVERLVANADDDAERDAFETLQGVVGDAE
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggagagcgacctacaggactactggggcgtcggcccgaagaccgccgcccgcctcacc
gaggcgctcggcgaggccgacgcggtccgcgccatcgagtccgccgacgtctccgcgctc
gtcgacgccggcgtctcgccgggtcgagccacccgcatcctccggcgcgccaccggtggt
ggcgacgccgagcgcttcgcgaccgacgacgcccgcgacgtctacaagcgcgtcctcgag
acggccgccgagttcgcgctcacgcgccgcgcccgcgaccgcatccgcgttctcacgccg
ctcgcggacgccgacgcgcgcgaagcccgcctcgacgcggtcttcgacgccgtcgagacg
tggcgcgagctcgacgagcgcgagcgcgaggccgccatcgccgccttcgaggagcacgac
agccgcgacggcggggagcgcgcggccgtcgaaaccgcgctcgcgctcgtcgacgccggc
ctcgactcgggggcgttcgcggcgttcgccgacatcgacgccgacgccctccgggacgcc
gccgacgccctgcgctatcgcgacggcgacggcgtccgcgacggctacgacgaccgcctc
gacgacctccgcgagcgcgcggccgccgtcgagcgcctcgaacgcgacgccctcggcgtg
ctcgaggacgtccgctcgggcgacctccgcggcccggacgagttccgcgaagccgtcgtc
gagcacgtcgcggacgtcacgggcgtcggccccgcgcgcatccgcgagcacgccgcgacc
gacgccgccgacgccgccgacttcgtgagcgggacgctccgctcgctcgccgacgccctc
cgcgcggacgccgcgagccgcgaggactcggtgcgcgcggacctcgacagcgccgtcgcc
gaggccgacgccgacgtcgaggccgcgaccgaggcggtccccgacgtggcgttcaccgtc
tcgctcgcgcgcttcgccgtcgcctacgacctcacgcgacccgcgtacaccgacgacgcc
gcgctcgcggtcgcgggcgcgcgcaacctcggtctccgcgcgtccggcgcgagcgtccaa
cccgtgacgtacgcgctcggcgaccacgacctcgcggggccgccggtcggcgaccgcgtc
gccgtcctcacgggcgcgaactccggcgggaagacgacgctcctcgagacgctcgccgaa
gtcgcgacgctcgccgtcctcgggcttcccgtccccgccgaccacgccgtcgtcgggcgg
ttcgaccgcctcgtcttccaccgccggcacgcgagcttcaacgccggcgtcctcgagacg
acgcttcgctccgtcgtgccgccgctcgcccgcgacggccgcacgctcatgctcgtcgac
gagttcgaggccatcaccgaacccgggagcgccgccgacctcctccacgggttggtctcg
ctcaccgccgaccacgacgcgctcggcgtctacgtcacccacctcgcggacgacctcgac
ccgctcccgggacgcgcgcgcgtcgacggcgtcttcgccgaagggctctccccggacctc
gccctcgaagtcgactaccagccccgcttcggcgtcgtcgggcgcagcacgcccgagttc
atcgtcgagcgcctcgtcgcgaacgccgacgacgacgccgagcgcgacgccttcgagacc
ctgcagggcgtcgtcggcgacgccgagtaa

DBGET integrated database retrieval system