Halarchaeum sp. CBA1220: EFA46_005845
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Entry
EFA46_005845 CDS
T06674
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halr03016
]
EFA46_005845 (truD)
Enzymes [BR:
halr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EFA46_005845 (truD)
Transfer RNA biogenesis [BR:
halr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EFA46_005845 (truD)
Prokaryotic type
EFA46_005845 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QLC33737
UniProt:
A0A7D5E2Y2
LinkDB
All DBs
Position
complement(1086319..1087668)
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AA seq
449 aa
AA seq
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MREAHPLERAVGMEYYASDAPGTGGSLREAAADFRVRELEAFDTEPADADTGDYPHLVFR
ATLTNWDTNGFARDLSNKLGISRERVSWAGTKDRNAVTTQLFSVRGVAADDLPEVSNAEL
DVVGRAGRPIRFGDLRGNDFTIVVRDADSDPVAAVTEELAAFGGGGGEGGDGDDRTSATV
GVPNYFGQQRFGSYRAITHEVGLHVLRGEWEDAVMAYVGNPSEHEPPETREARARVEEER
DWSAAIETFPRHLRYERAVLNTLAENGGSSAEDFREALETFPSNLQRLFVHAAQSYVFNL
ILSERLERGLPFDRAVEGDVVCFADDDGHPVLPDTDRRQRVTGRRVDVVNRHVERGRAFV
TAPLVGTDTEFGDGEPGEIERAVCETVGVEPGDFDLPGAFDSTGTRRAILLTTDLDVETD
PLTFDFALPKGSYATVLLREYLKAGPLDL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcccacccgctcgagcgcgcggtcggcatggagtactacgcgagcgacgcg
cccggcaccggcgggtcgctgcgcgaggcggccgccgacttccgcgtgcgcgaactcgag
gccttcgacaccgaacccgcggacgccgacaccggcgactacccgcacctcgtcttccgc
gcgacgctcacgaactgggacacgaacggcttcgcgcgcgacctctcgaacaagctcggt
atcagccgcgagcgcgtctcgtgggcggggacgaaggaccgcaacgccgtcaccacacag
ctcttcagcgtgcgcggcgtcgccgccgacgacctccccgaggtctcgaacgcggagctc
gacgtcgtggggcgcgccggccgccccatccgcttcggcgacctccgggggaacgacttc
accatcgtcgtccgcgacgccgactcggaccccgtcgcggcggtcacggaggaactcgcg
gcgttcggcgggggcggtggcgagggcggcgacggcgacgaccggacgagcgcgaccgtc
ggcgtcccgaactacttcggccagcagcgcttcgggagctatcgcgcgatcacccacgag
gtcggcctccacgtcctccggggggagtgggaggacgccgtgatggcgtacgtcgggaac
ccgtccgagcacgagccgccggagacccgcgaggcccgcgcgcgcgtcgaggaggagcgc
gactggagcgcggccatcgagacgttcccgcgccacttgcgctacgagcgcgccgtcctg
aacacgctcgcggagaacggtgggagtagtgcggaggacttccgcgaggccctcgagacg
ttcccgtcgaacctccagcggctcttcgtgcacgccgcccagtcctacgtcttcaacctg
attctctccgagcgcctcgagcgcggcctgccgttcgaccgggcggtcgagggcgacgtc
gtctgcttcgcggacgacgacggccaccccgtcctccccgacacggaccgccgccagcgc
gtcaccgggcggcgggtcgacgtcgtgaaccgccacgtcgagcgcggccgggcgttcgtc
accgcgcccctcgtcggcaccgacaccgagttcggcgacggcgagcccggggagatagag
cgcgcggtctgcgagacggtcggcgtcgagcccggcgacttcgacctcccgggcgcgttc
gactccacggggacgcgacgcgcgattctcctcaccacggacctcgatgtcgaaaccgac
ccgctgacgttcgacttcgcgctcccgaaggggagctacgcgaccgtgctcctgcgcgag
tacctcaaggccggcccgctcgacctctga
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