Halarchaeum sp. CBA1220: EFA46_006065
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Entry
EFA46_006065 CDS
T06674
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_006065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_006065
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_006065
Prokaryotic type
Archaeal type
TFB
EFA46_006065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
DUF8054_C
Cas12f1-like_TNB
Auto_anti-p27
Cyclin_C
Zn_ribbon_tTFIIB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QLC33778
LinkDB
All DBs
Position
1125945..1126913
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AA seq
322 aa
AA seq
DB search
MQNARTRARRHGERETEDEEATESTDECPECGGLVVADEEHGESVCMDCGLVVEEDDIDR
GPEWRAFDSQEKDQKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRK
WNERFRTRDAKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALEEDLLPGRSIEGV
STSCVYAAARQAGVPRSLDEITDVSRVEKAEIARTYRYVIRELGLEVRPADPESYVPRFA
SSLGLSDESEHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVAD
ISEVTIRNRYHELLEAEDTLPA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgcacgaaccagagcacgacgacacggcgaacgagagaccgaggacgaagag
gcgaccgaatcgaccgacgagtgccccgagtgtggcggtctcgtcgtcgccgacgaggag
cacggcgagtccgtctgcatggactgcgggctcgtcgtcgaggaggacgacatcgaccgc
gggccggagtggcgcgcgttcgactcccaggagaaggaccagaagtcgcgcgtcggggcc
ccgacgacgaacacgatgcacgacaagggcctctcgacgaacatcgactggcgcgacaag
gacgcctacggcaacagcctctcctcgaaccagcgccagaagatgcagcgcctgcgcaag
tggaacgagcgcttccgcacccgcgacgccaaggagcggaacctgaagcaggcgctcggc
gagatcgaccggatggcgagcgcgctcggcctccccgacaacgtccgggagaccgcctcc
gtcatctaccggcgcgccctcgaggaggacctcctccccgggcgctccatcgagggcgtc
tccacgtcctgcgtctacgcggccgcccgacaggccggcgtcccgcgcagcctcgacgag
atcaccgacgtctcgcgcgtcgagaaggccgagatcgcgcggacgtaccgctacgtcatc
cgggagctcggcctcgaagtccgacccgccgaccccgagagctacgtcccgcgcttcgcc
tcctcgctcggcctcagcgacgagtccgaacaccgcgcgcgcgaactcctgaagaccgcg
aaggacaagggcgtccactccgggaagtcgccggtcggcctcgccgccgccgccgtctac
gccgccgcgctcctcacgaacgagaagacgacgcaggcgaaagtgagcgaagtcgcggac
atcagcgaagtgaccatccgcaaccgctaccacgaactcctcgaagccgaggacaccctc
cccgcgtaa
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