Halarchaeum sp. CBA1220: EFA46_006190
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Entry
EFA46_006190 CDS
T06674
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halr03032
]
EFA46_006190
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_006190
Enzymes [BR:
halr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EFA46_006190
DNA replication proteins [BR:
halr03032
]
Prokaryotic type
DNA Topoisomerases
EFA46_006190
DNA repair and recombination proteins [BR:
halr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EFA46_006190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
DUF4332
Cdd1
IMS_HHH_1
DUF6964
DUF1266
Motif
Other DBs
NCBI-ProteinID:
QLC33803
UniProt:
A0A7D5HZS5
LinkDB
All DBs
Position
complement(1151672..1154152)
Genome browser
AA seq
826 aa
AA seq
DB search
MELIITEKDNAARRIADILSGGGASTERSGGVNVYEWGGRRCIGLSGHVVGVDFPPEYSD
WRDVEPAELAHAPVTKTPTQESIVNVLKRLAADADSAVIATDYDREGELIGKEAYELVRE
ANDDAPISRVRFSSITENEVKSAFADPDDLDFDLAAAGEARQIVDLIWGAALTRFLSLSA
RQVGDDFISVGRVQSPTLKLIVDKEREIEAFDPEDYWELFADLTKEGTAFEAQYFYLDEE
DTEAERVWDEGDAEAAFATLREAASAVVESVRRRTRTDDPPAPFNTTQFIRAAGSLGYGA
GRAMSIAEDLYTAGYITYPRTDNTVYPEDLDPAELLDALSAQRDFADSVSLLQELDELEA
TRGDEETTDHPPIHPTADLPSKSDLSEDEWELYELVVRRFFATLAEPAEWEHLRVVAAAD
DANLKANGRRLLEEGYHAVYPYFSADENHVPDVEEGEELAVSDPRLEAKQTQPPRRYGQS
RLIETMESLGVGTKSTRHNTIEKLYDRGYIENDPPRPTRLAMAVVEAAEEYADLVVSEEM
TADLEADMTAIAEGEKTLEEVTEESREILERIFEELGESREEIGEHLRESLKADKRLGPC
PDCGEDLLVRRSRQGSYFVGCDGYPECRFTLPLPSTGEPVVLDSECEEHGLNEVKMLAGR
STFVHGCPLCAAEEAAETEDRVIGPCPECGDAHGGELAIRKLQSGSRLVGCTRYPDCEYS
LPLPRRGDIEITDDHCEEHDLPELIVHDEGSEEPWELGCPICNYEEYRARQGLDDIEGIG
SKTKEKLSAAGVESLEDLREADAEAVAADVEGVSAERVRDWQAKAD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcatcatcaccgagaaggacaacgccgcccggcgcatcgccgatatcctcagc
gggggcggcgcgtccaccgagcggagcgggggcgtcaacgtctacgagtggggaggacgg
cgctgtatcggcctctccggacacgtcgtgggcgtggacttccccccggagtacagcgac
tggcgcgacgtcgagcccgccgagctcgcgcacgcgccggtgacgaagacgccgacccag
gagtccatcgtgaacgtcctcaagcgtctcgcggcggacgcggactcggcggtcatcgcg
accgactacgaccgcgagggcgaactcatcgggaaggaggcctacgagctcgtccgggag
gcgaacgacgacgccccgatctcgcgcgtgcgcttctcctcgatcacggagaacgaggtg
aagtccgcgttcgcggaccctgacgacctcgacttcgacctcgcggccgccggggaggcc
cgacagatcgtcgacctcatctggggggcggcgctcacgcgcttcctctcgctctccgcg
cgacaggtcggcgacgacttcatctccgtcgggagggtgcagtcgccgaccctgaagctc
atcgtggacaaggaacgcgagatcgaggcgttcgaccccgaggactactgggagctcttc
gcggacctcacgaaggaggggacggcgttcgaggcgcagtacttctacctcgacgaggag
gacaccgaggccgagcgcgtctgggacgagggcgacgcggaggcggcgttcgcgacgctg
cgcgaggccgcgagcgcggtcgtcgagtccgtgcggcggcgcacgcggacggacgacccg
cccgcgccgttcaacacgacgcagttcatccgcgccgccggctcgctggggtacggcgcg
gggcgtgcgatgagcatcgcggaggacctctacacggcgggctacatcacctacccccgg
acggacaacaccgtctaccccgaggacctcgacccggccgagctactggacgcgctctcc
gcgcagcgcgacttcgccgactcggtgtcgctcctgcaggagctcgacgagctggaggcg
acgcgcggcgacgaggagacgacggaccacccgccgattcacccgacggccgacctcccg
agcaaaagcgacctctcggaggacgagtgggagctctacgaactcgtcgtgcggcgcttc
ttcgcgacgctcgccgagcccgccgagtgggagcacctgcgcgtcgtcgcagctgccgac
gacgcgaacctgaaggcgaacggtcggcggttgctcgaggaggggtaccacgccgtctac
ccctacttcagcgcggacgagaaccacgtcccggacgtcgaggagggcgaggaactcgcc
gtctccgacccccggctggaggcgaagcagacccagccgccacggaggtacggccagtcg
cgactcatcgagaccatggagtcgctgggggtggggacgaagtcgacgaggcacaacacc
atcgagaagctctacgaccggggctacatcgagaacgacccgccgcgcccgacgcgactg
gcgatggcggtcgtggaggcggcggaggagtacgcggacctcgtcgtctccgaggagatg
accgccgacctcgaggcggacatgacggccatcgccgagggcgagaagacgctcgaggag
gtgaccgaggagtcgcgggagatactcgagcgcatcttcgaggagctgggcgagtcccgc
gaggagatcggcgagcacctgcgcgagtcgctgaaggcggacaagcgcctcgggccgtgc
cccgactgcggcgaggacctgctcgtcaggcggagccggcaggggtcgtacttcgtgggc
tgtgacggctatccggagtgtcgcttcacgctcccgctcccctcgacgggcgagccggtc
gtcctcgactcggagtgcgaggagcacgggctcaacgaggtgaagatgctcgcggggcgg
agcacgttcgtccacggctgtccgctctgcgcggccgaggaggccgccgagacggaggac
cgcgtcatcgggccgtgccccgagtgtggggacgcgcacggcggcgagctcgcgatccgc
aagctccagtcgggctcgcggctcgtcggctgtacgcgctatccggactgcgagtactcg
ctcccgctcccgcgacggggcgacatcgagataacggacgaccactgcgaggagcacgac
ctcccggagctaatcgtccacgacgagggcagcgaggagccgtgggagctcggctgtccg
atctgtaactacgaggagtaccgcgcccggcagggcctcgacgacatcgagggcatcggc
tcgaagacgaaggagaagctctcggcggcgggcgtggagagtctcgaggacctccgcgag
gcggacgccgaagcggtcgcggctgacgtcgagggcgtcagcgcggagcgcgtccgcgac
tggcaggcgaaggcggactga
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