Halarchaeum sp. CBA1220: EFA46_006210
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Entry
EFA46_006210 CDS
T06674
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
halr03036
]
EFA46_006210 (smc)
Chromosome and associated proteins [BR:
halr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
EFA46_006210 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
ATG16
AAA_15
AAA_21
Crescentin
DUF1664
GAS
AAA_29
AAA_13
FliJ
EzrA
Exonuc_VII_L
Fez1
FlaC_arch
MscS_porin
Filament
TACC_C
Cep57_CLD
Fib_alpha
KASH_CCD
NPV_P10
DUF4795
Baculo_PEP_C
Laminin_II
DUF724
APG6_N
DUF745
DUF3450
DUF4201
Motif
Other DBs
NCBI-ProteinID:
QLC33807
UniProt:
A0A7D5HT22
LinkDB
All DBs
Position
1156733..1160308
Genome browser
AA seq
1191 aa
AA seq
DB search
MYIDEIVLENFKSFGRTTRIPFYEDFTTISGPNGSGKSNIIDAVLFALGLARTRGMRAEK
LTDLIYNPSHDGDGETAGPREASVEVVLNNSDRALARSQVVNAAGSDDVGDVDTITVKRR
VKRTEDNYYSYYYLNGRSVNLSDVQDLLAQAGVTPEGYNVVMQGDVTGIINMTPGERREI
IDEIAGVAEFDAKKADAYDELDVVEDRIEEADLRIEEKRERLSQLEDERETALEYQGLKE
EKEEYESYRKAAELEEKRDDLENTEADTEEREAELEELQAELDTRRGRVERLQEDLDELN
AEIERKGEDEQLALKREIEEVKGDISRIEDKIEAAEERREQAENDRREAFVAIDRKQEEL
DELEAEIREVKVEKASVKADVQDRKADLADVEERIESVDTEFDEVKAELAAKKDDLEEAK
SERNDLQREKDRLLDEARRRSNEVSEAEDDIEAAREEIPELDRTLADLRDELEKAERNRA
QIEDVVEDLKSQKQAHQEELNEVEDDLQAAQEEYARLEANAEQSGDSSYGRAVSTILNSG
KEGVHGTVAQLGGVAGEHATAAETAAGGRMAHVVVDDDGVGQSCIEYLKSRNAGRATFLP
ITEMQNRSLPREPDDPGVVGFAFDLVEFDRQYAPVFSYVLGDTLVVEDMETAREFMGDYR
LVTLDGELVEKSGAMTGGSRSGSRYSFSKSGQGQLERVASKINDLEDERQSIRSDIRDVE
ERLDGARDRKSDAAETVRSLEGDIERVEAEKADAKTRISDLEERLEELEAERAEVDERMG
ELDEEIAAQSERIESIEADIEELESELADSEIPELTAEKEEIRDDIADLEDQLSSLDGEL
NDLQLQQQYAENEIEDLHDDVEDAQNTKAEQAERIESFEAEIEAKRETLAEKEAAVDDLE
DELAELKAEREELKEELQEAQRERDEQQQRVESVQSRVESLRRAAERLREEIADLEEAVG
DYDAEEIPEIDEVEDAVARLERQMEALEPVNMLAIEEYDEVEADLDDLEEKRATLVSEAD
GIRERIESYESQKRQTFMDAYEAIDGHFQRIFSRLSAGSGELVLEDEDDPFEGGLTMKAQ
PADKPVQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAVNADRVGELVDE
LAEDAQFVVVSHRSAMLERSERAIGVTMQGDNVSSVTGIDLTNGEEAPADD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcgacgaaatcgttctcgagaacttcaagagcttcggccggacgacacggatc
ccgttctacgaggacttcaccaccatcagcggcccgaacggcagcgggaagtccaacatc
atcgacgccgtcctcttcgcgctcggtctcgctcggacgcgcggcatgcgcgccgagaaa
ctcaccgacctcatctacaacccgagccacgacggcgacggcgagacggcgggcccgcgt
gaggcgagcgtcgaggtcgtcctgaacaattccgaccgcgcgctcgcgcgctcgcaggtc
gtcaacgccgccgggagcgacgacgtcggcgacgtcgacaccatcaccgtgaagcgccgc
gtgaagcgcaccgaggacaactactactcctactactacctcaacggccggtcggtgaac
ctctcggacgtccaggacctgctcgcgcaggccggcgtcacccccgaggggtacaacgtc
gtcatgcagggcgacgtcaccggcatcatcaacatgacgcccggcgagcgccgcgagatc
atcgacgagatcgcgggcgtcgccgagttcgacgcgaagaaggccgacgcctacgacgag
ctcgacgtcgtcgaggaccgcatcgaggaggccgacctccgcatcgaggagaaacgcgag
cgtctctcgcagctcgaggacgagcgcgagaccgccctcgagtatcaaggtctcaaggag
gagaaggaggagtacgagtcctacaggaaggccgccgaactcgaggagaagcgcgacgac
ctcgagaacaccgaggccgacaccgaggagcgcgaggcggaactcgaggagttgcaggcc
gaactcgacacgcgtcgcggccgcgtggagcgcctgcaggaggacctcgacgagctgaac
gccgagatcgagcgcaagggcgaggacgaacagctcgcgctcaagcgcgagatagaggaa
gtgaagggcgacatcagtcgcatcgaggacaagatcgaggccgcggaggagcggcgcgag
caggcggagaacgaccgccgcgaggcgttcgtcgccatcgaccgcaagcaggaggagctc
gacgaactggaggcggagatccgcgaggtgaaagtcgagaaggcctccgtgaaggcggac
gtgcaggaccggaaggccgacctcgcggacgtcgaggagcgcatcgagtccgtcgacacc
gagttcgacgaggtgaaggcggagctcgcggcgaagaaggacgacctcgaggaggcgaag
agcgagcgcaacgacctccagcgcgagaaggaccgcctgctcgacgaggcgcgccggcgc
tcgaacgaggtgagcgaggccgaggacgacatcgaggcggcgcgcgaggagattccggag
ctcgaccggacgctcgccgacctccgcgacgaactcgagaaggccgagcggaaccgcgcg
cagatcgaggacgtcgtcgaggacctgaagtcccagaagcaggcccaccaggaggagctg
aacgaggtcgaggacgacctgcaggccgcacaggaggagtacgcgcgcttggaggcgaac
gccgagcagtccggcgactcctcctacggccgtgcggtctcgacgatcctgaacagcggg
aaggagggcgtccacggcacggtcgcccagctcggcggcgtcgcgggcgagcacgcgacg
gcggcggagaccgccgccggcggccggatggcgcacgtcgtcgtggacgacgacggcgtc
ggccagtcctgcatcgagtacctgaagtcccggaacgcgggtcgggcgaccttcctcccc
atcacggagatgcagaaccgctcgctcccgcgcgagccggacgaccccggcgtcgtgggc
ttcgcgttcgacctcgtggagttcgaccggcagtacgcgcccgtcttctcctacgtgctc
ggcgacacgctcgtcgtcgaggacatggagacggcgcgcgagttcatgggcgactaccgg
ctcgtcacgctcgacggcgaactcgtcgagaagagcggcgcgatgacgggcggctcccgc
tcggggtcgcgctactccttctcgaagtccgggcagggccagctcgaacgggtcgcctcg
aagataaacgacctcgaggacgagcgccagtcgattcggagcgacatccgggacgtcgag
gagcgcctcgacggcgcgcgcgaccggaagtcggacgccgccgagacggtgcgctcgctc
gagggcgacatcgagcgcgtcgaggcggagaaggcggacgcgaagacgcgtatctcggac
ctcgaggagcgcctcgaggagctcgaggccgagcgcgccgaggttgacgagcggatgggc
gagctcgacgaggagatcgccgcccagtccgagcgcatcgagtccatcgaggccgacatc
gaggagctggagtcggagctcgcggactcggagattcccgaactcaccgccgagaaggag
gaaatccgggacgacatcgcggacctcgaggaccagctgtcctcgctcgacggcgagctg
aacgacctccagctccaacagcagtacgcggagaacgaaatcgaggacctccacgacgac
gtggaggacgcacagaacacgaaggccgagcaggccgagcggatcgagtccttcgaggcg
gagatcgaggcgaagcgcgagacgctcgccgagaaggaggccgccgtcgacgacctcgag
gacgagctcgcggagctgaaggccgagcgcgaggagctcaaggaggagctacaggaggcc
cagcgcgagcgcgacgagcaacaacaacgggtcgagtccgtccagagtcgcgtggagagc
ctgcggcgggcggccgagcgactccgcgaggagatcgcggacctcgaggaggcggtcggc
gactacgacgccgaggagatcccggagatcgacgaggtggaggacgccgtcgcgcgcctc
gaacggcagatggaggccctcgagcccgtgaacatgctcgcgatagaggagtacgacgag
gtcgaggcggacctcgacgacctcgaggagaagcgcgcgacgctcgtctccgaggccgac
ggcatccgcgagcgcatcgagagctacgagtcccagaagcgccagacgttcatggacgcc
tacgaggccatcgacgggcacttccagcgcatcttctcgcggctctccgccggttctggc
gagctcgtcctcgaggacgaggacgaccccttcgagggcgggctgacgatgaaggcccag
cccgccgacaagcccgttcagcgcctcgacgccatgtccggcggggagaagtcgctgacg
gcgctcgcgttcatcttcgcgatccagcgacacaaccccgcgccgttctacgcgctcgac
gaggtggacgcgttcctcgacgcggtgaacgcggaccgcgtcggcgaactcgtggacgag
ctcgccgaggacgcccagttcgtcgtcgtcagccaccgctcggcgatgctcgagcgctcc
gagcgcgccatcggtgtgacgatgcagggcgacaacgtgagcagcgtgacgggcatcgac
ctgacgaacggcgaggaggcgccggcggatgactag
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