Halarchaeum sp. CBA1220: EFA46_006210
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Entry
EFA46_006210 CDS
T06674
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
halr03036
]
EFA46_006210 (smc)
Chromosome and associated proteins [BR:
halr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
EFA46_006210 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
Rod_CreS
AAA_21
FKBP15
ATG16
CCDC18_2nd
DUF1664
CEP135_TSGA10_CC
AAA_29
GAS
AAA_13
CCDC146_CC_N
SPC25_N
CCDC89
LEKR1
CCDC192
Fez1
ODF2_C
Exonuc_VII_L
CC_Liprin_beta
EzrA
MscS_porin
AAA_15
FlaC_arch
CLIP1
Filament
Fib_alpha
TACC_C
Cep57_CLD
DUF8429
NOCA1_mid
CCDC122
KASH_CCD
HH_AprE
NPV_P10
DUF4795
Baculo_PEP_C
HAUS1
DUF724
APG6_N
DUF3450
YGR130C_N
DUF745
CCDC113_CCDC96_CC
CC_Bre1
Motif
Other DBs
NCBI-ProteinID:
QLC33807
LinkDB
All DBs
Position
1156733..1160308
Genome browser
AA seq
1191 aa
AA seq
DB search
MYIDEIVLENFKSFGRTTRIPFYEDFTTISGPNGSGKSNIIDAVLFALGLARTRGMRAEK
LTDLIYNPSHDGDGETAGPREASVEVVLNNSDRALARSQVVNAAGSDDVGDVDTITVKRR
VKRTEDNYYSYYYLNGRSVNLSDVQDLLAQAGVTPEGYNVVMQGDVTGIINMTPGERREI
IDEIAGVAEFDAKKADAYDELDVVEDRIEEADLRIEEKRERLSQLEDERETALEYQGLKE
EKEEYESYRKAAELEEKRDDLENTEADTEEREAELEELQAELDTRRGRVERLQEDLDELN
AEIERKGEDEQLALKREIEEVKGDISRIEDKIEAAEERREQAENDRREAFVAIDRKQEEL
DELEAEIREVKVEKASVKADVQDRKADLADVEERIESVDTEFDEVKAELAAKKDDLEEAK
SERNDLQREKDRLLDEARRRSNEVSEAEDDIEAAREEIPELDRTLADLRDELEKAERNRA
QIEDVVEDLKSQKQAHQEELNEVEDDLQAAQEEYARLEANAEQSGDSSYGRAVSTILNSG
KEGVHGTVAQLGGVAGEHATAAETAAGGRMAHVVVDDDGVGQSCIEYLKSRNAGRATFLP
ITEMQNRSLPREPDDPGVVGFAFDLVEFDRQYAPVFSYVLGDTLVVEDMETAREFMGDYR
LVTLDGELVEKSGAMTGGSRSGSRYSFSKSGQGQLERVASKINDLEDERQSIRSDIRDVE
ERLDGARDRKSDAAETVRSLEGDIERVEAEKADAKTRISDLEERLEELEAERAEVDERMG
ELDEEIAAQSERIESIEADIEELESELADSEIPELTAEKEEIRDDIADLEDQLSSLDGEL
NDLQLQQQYAENEIEDLHDDVEDAQNTKAEQAERIESFEAEIEAKRETLAEKEAAVDDLE
DELAELKAEREELKEELQEAQRERDEQQQRVESVQSRVESLRRAAERLREEIADLEEAVG
DYDAEEIPEIDEVEDAVARLERQMEALEPVNMLAIEEYDEVEADLDDLEEKRATLVSEAD
GIRERIESYESQKRQTFMDAYEAIDGHFQRIFSRLSAGSGELVLEDEDDPFEGGLTMKAQ
PADKPVQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAVNADRVGELVDE
LAEDAQFVVVSHRSAMLERSERAIGVTMQGDNVSSVTGIDLTNGEEAPADD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcgacgaaatcgttctcgagaacttcaagagcttcggccggacgacacggatc
ccgttctacgaggacttcaccaccatcagcggcccgaacggcagcgggaagtccaacatc
atcgacgccgtcctcttcgcgctcggtctcgctcggacgcgcggcatgcgcgccgagaaa
ctcaccgacctcatctacaacccgagccacgacggcgacggcgagacggcgggcccgcgt
gaggcgagcgtcgaggtcgtcctgaacaattccgaccgcgcgctcgcgcgctcgcaggtc
gtcaacgccgccgggagcgacgacgtcggcgacgtcgacaccatcaccgtgaagcgccgc
gtgaagcgcaccgaggacaactactactcctactactacctcaacggccggtcggtgaac
ctctcggacgtccaggacctgctcgcgcaggccggcgtcacccccgaggggtacaacgtc
gtcatgcagggcgacgtcaccggcatcatcaacatgacgcccggcgagcgccgcgagatc
atcgacgagatcgcgggcgtcgccgagttcgacgcgaagaaggccgacgcctacgacgag
ctcgacgtcgtcgaggaccgcatcgaggaggccgacctccgcatcgaggagaaacgcgag
cgtctctcgcagctcgaggacgagcgcgagaccgccctcgagtatcaaggtctcaaggag
gagaaggaggagtacgagtcctacaggaaggccgccgaactcgaggagaagcgcgacgac
ctcgagaacaccgaggccgacaccgaggagcgcgaggcggaactcgaggagttgcaggcc
gaactcgacacgcgtcgcggccgcgtggagcgcctgcaggaggacctcgacgagctgaac
gccgagatcgagcgcaagggcgaggacgaacagctcgcgctcaagcgcgagatagaggaa
gtgaagggcgacatcagtcgcatcgaggacaagatcgaggccgcggaggagcggcgcgag
caggcggagaacgaccgccgcgaggcgttcgtcgccatcgaccgcaagcaggaggagctc
gacgaactggaggcggagatccgcgaggtgaaagtcgagaaggcctccgtgaaggcggac
gtgcaggaccggaaggccgacctcgcggacgtcgaggagcgcatcgagtccgtcgacacc
gagttcgacgaggtgaaggcggagctcgcggcgaagaaggacgacctcgaggaggcgaag
agcgagcgcaacgacctccagcgcgagaaggaccgcctgctcgacgaggcgcgccggcgc
tcgaacgaggtgagcgaggccgaggacgacatcgaggcggcgcgcgaggagattccggag
ctcgaccggacgctcgccgacctccgcgacgaactcgagaaggccgagcggaaccgcgcg
cagatcgaggacgtcgtcgaggacctgaagtcccagaagcaggcccaccaggaggagctg
aacgaggtcgaggacgacctgcaggccgcacaggaggagtacgcgcgcttggaggcgaac
gccgagcagtccggcgactcctcctacggccgtgcggtctcgacgatcctgaacagcggg
aaggagggcgtccacggcacggtcgcccagctcggcggcgtcgcgggcgagcacgcgacg
gcggcggagaccgccgccggcggccggatggcgcacgtcgtcgtggacgacgacggcgtc
ggccagtcctgcatcgagtacctgaagtcccggaacgcgggtcgggcgaccttcctcccc
atcacggagatgcagaaccgctcgctcccgcgcgagccggacgaccccggcgtcgtgggc
ttcgcgttcgacctcgtggagttcgaccggcagtacgcgcccgtcttctcctacgtgctc
ggcgacacgctcgtcgtcgaggacatggagacggcgcgcgagttcatgggcgactaccgg
ctcgtcacgctcgacggcgaactcgtcgagaagagcggcgcgatgacgggcggctcccgc
tcggggtcgcgctactccttctcgaagtccgggcagggccagctcgaacgggtcgcctcg
aagataaacgacctcgaggacgagcgccagtcgattcggagcgacatccgggacgtcgag
gagcgcctcgacggcgcgcgcgaccggaagtcggacgccgccgagacggtgcgctcgctc
gagggcgacatcgagcgcgtcgaggcggagaaggcggacgcgaagacgcgtatctcggac
ctcgaggagcgcctcgaggagctcgaggccgagcgcgccgaggttgacgagcggatgggc
gagctcgacgaggagatcgccgcccagtccgagcgcatcgagtccatcgaggccgacatc
gaggagctggagtcggagctcgcggactcggagattcccgaactcaccgccgagaaggag
gaaatccgggacgacatcgcggacctcgaggaccagctgtcctcgctcgacggcgagctg
aacgacctccagctccaacagcagtacgcggagaacgaaatcgaggacctccacgacgac
gtggaggacgcacagaacacgaaggccgagcaggccgagcggatcgagtccttcgaggcg
gagatcgaggcgaagcgcgagacgctcgccgagaaggaggccgccgtcgacgacctcgag
gacgagctcgcggagctgaaggccgagcgcgaggagctcaaggaggagctacaggaggcc
cagcgcgagcgcgacgagcaacaacaacgggtcgagtccgtccagagtcgcgtggagagc
ctgcggcgggcggccgagcgactccgcgaggagatcgcggacctcgaggaggcggtcggc
gactacgacgccgaggagatcccggagatcgacgaggtggaggacgccgtcgcgcgcctc
gaacggcagatggaggccctcgagcccgtgaacatgctcgcgatagaggagtacgacgag
gtcgaggcggacctcgacgacctcgaggagaagcgcgcgacgctcgtctccgaggccgac
ggcatccgcgagcgcatcgagagctacgagtcccagaagcgccagacgttcatggacgcc
tacgaggccatcgacgggcacttccagcgcatcttctcgcggctctccgccggttctggc
gagctcgtcctcgaggacgaggacgaccccttcgagggcgggctgacgatgaaggcccag
cccgccgacaagcccgttcagcgcctcgacgccatgtccggcggggagaagtcgctgacg
gcgctcgcgttcatcttcgcgatccagcgacacaaccccgcgccgttctacgcgctcgac
gaggtggacgcgttcctcgacgcggtgaacgcggaccgcgtcggcgaactcgtggacgag
ctcgccgaggacgcccagttcgtcgtcgtcagccaccgctcggcgatgctcgagcgctcc
gagcgcgccatcggtgtgacgatgcagggcgacaacgtgagcagcgtgacgggcatcgac
ctgacgaacggcgaggaggcgccggcggatgactag
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integrated database retrieval system
