Halarchaeum sp. CBA1220: EFA46_007030
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Entry
EFA46_007030 CDS
T06674
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_007030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_007030
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_007030
Prokaryotic type
Archaeal type
TFB
EFA46_007030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Zn_ribbon_tTFIIB
DZR
TFIIB_C_1
Cyclin_N
DZR_2
Zn_ribbon_8
Zn_ribbon_19
HTH_Tnp_ISL3
Sigma70_r4
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QLC33966
LinkDB
All DBs
Position
1315251..1316231
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AA seq
326 aa
AA seq
DB search
MSDTSIRTFTSDRQHTESTVEEESETRTDTTICPECGGDLRTDEGHGETVCSDCGLVVED
DAIDRGPEWRAFNSQEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKM
QRLRTWNERFRTRNSKERNLKQALGEIERMSSALGLPKEVRETASVIYRRALNEDLLPGR
SIEGVATASLYAAARQMQTPRSIDEVATVSRIDDMEFKRTYRYIVRELKLEVAPADPASY
VPRFVSELDLNDEVERRARDLLKTAGDKGVTSGKSPVGLAAAAIYAASLLANQKVTQSEV
SAVTDVSEVTIRNRYQELLEAAETVQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccagcatccgcacgttcaccagcgaccgccagcacaccgagagcaccgtc
gaggaggagtccgagacgcgaaccgacaccacgatctgtcccgagtgtgggggcgacctc
cgcaccgacgaggggcacggcgagaccgtctgttcggactgtggcctcgtcgtcgaggac
gacgccatcgaccgcggtcccgagtggcgggcgttcaacagccaggagaaggaccagaaa
tcgcgcgtgggcgccccgacgacgaacatgatgcacgacaaggggctctcgacgaacatc
ggctggcaggacaaggacgcctacggcaactccctctcgagccgccagcgccagaagatg
caacgcctccgcacctggaacgagcgcttccgcacccgtaacagcaaggagcggaacctg
aagcaggcgctcggcgaaatcgagcgcatgagctccgccctcggtctccccaaggaggta
cgcgagacggcgtccgtcatctaccgccgggcgctcaacgaggacctcctcccggggcgc
tccatcgagggcgtcgcgacggcgtcgctctacgcggcggcacgccagatgcagacgccg
cgctccatcgacgaggtcgcgaccgtctcgcgcatcgacgacatggagttcaagcggacg
taccgctacatcgtccgcgagctcaaactcgaggtcgcgcccgccgaccccgcgagctac
gtcccgcgcttcgtcagcgaactcgacctcaacgacgaggtcgagcgacgcgcgcgcgac
ctgctcaagaccgccggcgacaagggcgtcaccagcgggaagtcgccggtcggcctcgcc
gccgccgcgatctacgcggcgagcctgctcgccaaccagaaggtcacccagagcgaggtc
agcgcggtgaccgacgtctccgaggtcaccatccgcaaccgctatcaggagctcctcgag
gccgccgagacggtccagtaa
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