KEGG   Halarchaeum sp. CBA1220: EFA46_008855
Entry
EFA46_008855      CDS       T06674                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
halr  Halarchaeum sp. CBA1220
Pathway
halr03030  DNA replication
halr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:halr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EFA46_008855 (fen)
   03410 Base excision repair
    EFA46_008855 (fen)
   03450 Non-homologous end-joining
    EFA46_008855 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halr03032]
    EFA46_008855 (fen)
   03400 DNA repair and recombination proteins [BR:halr03400]
    EFA46_008855 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:halr04147]
    EFA46_008855 (fen)
DNA replication proteins [BR:halr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EFA46_008855 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EFA46_008855 (fen)
DNA repair and recombination proteins [BR:halr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EFA46_008855 (fen)
Exosome [BR:halr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   EFA46_008855 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: QLC34309
LinkDB
Position
1626778..1627761
AA seq 327 aa
MGNADLRQLAAIEEVAFDDLDGDVVAVDAHNWLYKYLTTTVRFTRDDAYTTSEGVEVPNL
IGVVQGLPKFFENDLTPVFVFDGRVVGLKDEEVEERRAEREKREERLEEAREAGDALEVA
RLDSQTQRLTETIHETTRELLSLLDVPVVEAPAEGEAQASYMARTDGDVDYVGSDDYDCL
LLGAPVTLRQLTSSGAVERMDFEATLEEHDVTWEQLVDVGILCGTDFNDGLSGYGPKTAL
QAVREHGDLWGVLDAEDAYIDDADRIRDLFLDPDVTDDYDYDESVDPDLDAARDYLAEEW
EIPAEETERAFERIEESLTQTGLDDWL
NT seq 984 nt   +upstreamnt  +downstreamnt
atgggaaacgcggacctccgccagctcgccgcgatcgaggaggtcgccttcgacgacctc
gacggtgacgtcgtcgccgtcgacgcgcacaactggctctacaagtacctcaccacgacc
gttcgattcacccgcgacgacgcctacacgacgagcgagggcgtcgaagtcccgaacctc
atcggcgtcgtgcagggcctcccgaagttcttcgagaacgacctcacgcccgtcttcgtc
ttcgacggccgcgtcgtcggcctcaaggacgaggaggtcgaggagcgccgcgcggagcgc
gagaaacgcgaggaacgcctcgaggaagcccgcgaggccggtgacgcgctggaggtcgcg
cgcctcgactcgcagactcagcgcctcaccgagaccatccacgagacgacgcgggaactg
ctctcgctcctcgacgtcccggtcgttgaggcgcccgccgagggcgaagcccaggcctcc
tacatggcccggacggacggcgacgtcgactacgtcgggagcgacgactacgactgcctc
ctgttgggcgcgcccgtcaccctccgccaactcacgagctcgggcgccgtcgagcgcatg
gacttcgaggccaccctcgaggagcacgacgtgacgtgggagcaactcgtcgacgtcggc
atcctctgcgggacggacttcaacgacggcctctcggggtacggcccgaagaccgcactc
caagccgtacgggagcacggcgacctctggggcgtcctcgacgccgaggacgcctacatc
gacgacgccgaccgcatccgcgacctcttcctcgacccggacgtcacggacgactacgac
tacgacgagtccgtcgacccggacctcgacgccgcgcgcgactacctcgcggaggagtgg
gagattcccgccgaggagaccgagcgcgccttcgagcgcatcgaggagtcgctcacgcag
accggcctcgacgactggctatag

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