Halarchaeum sp. CBA1220: EFA46_008855
Help
Entry
EFA46_008855 CDS
T06674
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03030
DNA replication
halr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFA46_008855 (fen)
03410 Base excision repair
EFA46_008855 (fen)
03450 Non-homologous end-joining
EFA46_008855 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halr03032
]
EFA46_008855 (fen)
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_008855 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halr04147
]
EFA46_008855 (fen)
DNA replication proteins [BR:
halr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
EFA46_008855 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
EFA46_008855 (fen)
DNA repair and recombination proteins [BR:
halr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
EFA46_008855 (fen)
Exosome [BR:
halr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EFA46_008855 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
QLC34309
LinkDB
All DBs
Position
1626778..1627761
Genome browser
AA seq
327 aa
AA seq
DB search
MGNADLRQLAAIEEVAFDDLDGDVVAVDAHNWLYKYLTTTVRFTRDDAYTTSEGVEVPNL
IGVVQGLPKFFENDLTPVFVFDGRVVGLKDEEVEERRAEREKREERLEEAREAGDALEVA
RLDSQTQRLTETIHETTRELLSLLDVPVVEAPAEGEAQASYMARTDGDVDYVGSDDYDCL
LLGAPVTLRQLTSSGAVERMDFEATLEEHDVTWEQLVDVGILCGTDFNDGLSGYGPKTAL
QAVREHGDLWGVLDAEDAYIDDADRIRDLFLDPDVTDDYDYDESVDPDLDAARDYLAEEW
EIPAEETERAFERIEESLTQTGLDDWL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggacctccgccagctcgccgcgatcgaggaggtcgccttcgacgacctc
gacggtgacgtcgtcgccgtcgacgcgcacaactggctctacaagtacctcaccacgacc
gttcgattcacccgcgacgacgcctacacgacgagcgagggcgtcgaagtcccgaacctc
atcggcgtcgtgcagggcctcccgaagttcttcgagaacgacctcacgcccgtcttcgtc
ttcgacggccgcgtcgtcggcctcaaggacgaggaggtcgaggagcgccgcgcggagcgc
gagaaacgcgaggaacgcctcgaggaagcccgcgaggccggtgacgcgctggaggtcgcg
cgcctcgactcgcagactcagcgcctcaccgagaccatccacgagacgacgcgggaactg
ctctcgctcctcgacgtcccggtcgttgaggcgcccgccgagggcgaagcccaggcctcc
tacatggcccggacggacggcgacgtcgactacgtcgggagcgacgactacgactgcctc
ctgttgggcgcgcccgtcaccctccgccaactcacgagctcgggcgccgtcgagcgcatg
gacttcgaggccaccctcgaggagcacgacgtgacgtgggagcaactcgtcgacgtcggc
atcctctgcgggacggacttcaacgacggcctctcggggtacggcccgaagaccgcactc
caagccgtacgggagcacggcgacctctggggcgtcctcgacgccgaggacgcctacatc
gacgacgccgaccgcatccgcgacctcttcctcgacccggacgtcacggacgactacgac
tacgacgagtccgtcgacccggacctcgacgccgcgcgcgactacctcgcggaggagtgg
gagattcccgccgaggagaccgagcgcgccttcgagcgcatcgaggagtcgctcacgcag
accggcctcgacgactggctatag
DBGET
integrated database retrieval system