Halarchaeum sp. CBA1220: EFA46_009105
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Entry
EFA46_009105 CDS
T06674
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
halr
Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_009105
Enzymes [BR:
halr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFA46_009105
DNA repair and recombination proteins [BR:
halr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EFA46_009105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLC34358
UniProt:
A0A7D5E1D2
LinkDB
All DBs
Position
complement(1693693..1696545)
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AA seq
950 aa
AA seq
DB search
MTDLEPNDQQQELIDSTDGLYLVDAGAGTGKTFTVTRRYANIVSQDAVEPDDVLLVTFTN
NAAGEMKERIVGNCHYGMRELADAPIQTFHSLCHDILEEHGHAAPTYLGIDDRITGSTRI
IEDEHVEQALFGEFIDRFSDDHPEYDDVFRALSNPDELLGLINQLAAKGVFPDADGWYRD
GERHLDGDFAAFKQQFDDLNEPRNGGSKQSLLRSKLGRYGRKKTYLPDAPAKSEIRGSGK
QVPDDIARLVFEEERAELKAFVHDVYHEYLEFALRRNFLNFGMLQLFAFVLLCENHELCE
EVAFEYVMIDEFQDSSEIQFKLALLLAGANNICVVGDWKQSIYSFQYADVDNIVEFEDRL
GRFVDQLNSDHERVSFPTSPVTTIELVENYRSTQEILDFSEHGLRVPAANRDDVDVEAVD
DRIVSLRSNADHENTTIEAVQSDEEQEAVLAKIQEIVSNEDYRIEDEDGGLRVPEYSDVA
VLTRTRDFGRELLRAAEEYGLPMAYEGGIELFRTDQAKLLLAWLRILEDDVDRGWAVVLE
RAGYTLDEIDAILDCEAYPESMVAFREELEEMETLGGVARRVFARYGYDGPTADVVLHTL
QSVHNATTQTRGDLIRFIERAIETGSTHEVHAGAGTNSVTVQTIHATKGLEYPIIILANM
NSGRFPPGGGGGGVIRYDDPVGLRQRKVYSEEPHGLPHVYDNWQADVLQKCLPRNYDEER
RLLYVAVTRAESHVVFTAGEDPNTFLEELPVEVEAVTPAVAESTQEETEQTALQVEMPVP
EGPRGHTPHTLMRDEVFEDVEDGRGTEFGTQVHDFAEAYALDEDVEPRNVDETNVARFID
SLDGELLVEEDAYLPLTVNGERVTISGIVDLVHLTPNRVEIVDYKTDRGRHGESEYRKQL
SVYYHVASEVYPSREITVSILYTEIGRRQTIEPMALNEIRDLVLRAGTSM
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctcgaaccgaacgaccagcaacaggaactcatcgacagcacggacggcctc
tacctcgtggacgccggcgcagggacgggtaagacgttcaccgtgacgcgccgctacgcc
aacatcgtctcacaagatgctgtcgagcctgacgacgtcctgcttgtgacgttcacgaac
aacgcggccggcgagatgaaagagcgcatcgtcgggaattgtcactacgggatgcgggaa
cttgcggacgcaccgatccagacgttccactcgctgtgccacgacatcctcgaagagcac
gggcacgccgcgccaacctacctcggcatcgacgaccgcatcactggatcgacgcgcatc
attgaggacgaacacgtcgaacaagcgctgtttggcgagttcatcgaccgattcagcgac
gatcatcccgagtacgacgatgtcttccgcgcgctctcgaacccggacgaactgctcggg
ctcatcaatcagctcgccgcaaagggggtgttccccgacgccgacggctggtaccgtgac
ggtgagcgccatctcgatggcgactttgcggcgttcaaacagcagttcgacgacctgaac
gaaccgcggaacggcgggagcaaacagtcgctacttcggtcgaaactcggccggtacggc
cgcaaaaaaacctacctgcctgatgcacccgcgaagtcagagattcgcggcagcggcaag
caagtccccgacgatattgctcgactcgtcttcgaggaggaacgggcggaactgaaggcg
ttcgtccacgacgtctaccacgagtatctggagttcgcgctgcggcggaacttcctaaac
ttcgggatgctccagctgttcgcgttcgtcctgctctgcgagaaccacgagctgtgtgaa
gaggtcgcgtttgagtacgtgatgatcgacgagtttcaggactcaagcgagattcagttc
aaactcgcgctcctgctcgccggcgcgaacaacatctgtgtcgtcggggactggaagcag
agcatctacagcttccagtacgccgacgtcgacaacatcgtcgagttcgaggaccgactc
ggccggttcgtcgaccaactgaatagtgaccacgaacgcgtctcgtttcccacgagtccc
gtcaccaccatcgaactcgtcgaaaactaccgctccacgcaggagatcctggacttctcg
gaacacggcctgcgcgtccccgcggccaaccgcgacgacgtcgacgttgaggccgtcgac
gaccgcatcgtctcgctccggtcgaacgcagaccacgagaacaccaccatcgaggcggtt
cagagcgacgaagaacaggaggcagtgctggcgaagatacaggagatcgtcagtaacgag
gattaccgcatcgaggacgaagacggcggcctccgggtgcccgagtatagcgacgtcgca
gtattgacgcggacccgtgacttcggtcgcgagttgctcagggctgccgaggagtacggt
ctcccgatggcgtacgagggtggcatcgagctcttcagaactgaccaggcgaagctcttg
ctcgcctggctgcgcatcctcgaagacgacgtcgaccgcggctgggcggtcgtgctcgag
cgcgccggctacacactcgacgagatcgacgccatcctcgactgcgaggcgtaccccgag
agcatggtcgcgttccgcgaagagctcgaggagatggagacgctgggcggcgtcgcgcgg
cgcgtgttcgctcgctacggctacgacggcccgacggccgacgtcgtcctccacacgctc
cagtcggtccacaacgcgaccacacagacgcgtggcgacctcatccggttcatcgaacga
gcgatcgagactgggagtacccacgaggtgcacgcgggtgcggggacgaactcggtgacc
gtccagacgattcacgccacgaagggcctcgaataccccatcatcatcctcgcgaacatg
aacagcgggcgcttcccgccgggcgggggtggtggtggcgtcatcaggtacgacgaccct
gttggcttgcggcagcgcaaagtgtattcggaggaaccacacggactgccacacgtctac
gacaactggcaggccgacgtcctccagaagtgcctgccacgcaattacgacgaagaacgc
cgtctcctctacgtcgccgtcacgcgcgccgagagccacgtcgtcttcaccgccggtgag
gacccgaacaccttcctcgaagaactcccagtcgaggttgaggcagtcactcccgcagtt
gcagagagtacgcaagaggagacggaacagactgcgctccaggtcgagatgccggtccca
gaggggccacgaggtcacactccgcacacgctcatgcgcgacgaagtcttcgaggacgtt
gaggacggccggggaaccgagttcggtacgcaggtccacgacttcgccgaggcgtacgca
ctcgatgaggacgtcgagccacggaacgtcgatgaaacgaacgtagcgcggttcatcgac
agccttgatggcgaattgttggtcgaagaggacgcttatcttccacttacggtaaatggt
gagcgtgtgaccatttcgggcatcgtcgacctcgttcacctgacgccaaaccgcgtcgag
atagtcgactataagactgaccgtggtcggcacggtgaatcggaataccgcaagcaactc
agcgtctattaccacgtcgcaagtgaggtctacccgagtcgcgaaatcacagttagcatt
ctgtacacggagataggtcgtcgccagactatcgagccaatggcactcaatgagattagg
gatcttgtccttagagctggcacgtcgatgtga
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