Halarchaeum sp. CBA1220: EFA46_009765
Help
Entry
EFA46_009765 CDS
T06674
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_009765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_009765
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_009765
Prokaryotic type
Archaeal type
TFB
EFA46_009765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Zn_ribbon_RRN7
Cyclin_N
Zn_ribbon_3
DZR
DZR_2
Zn_ribbon_tTFIIB
BRF2-like_C_cyclin_rpt
Sigma70_r4
DUF8106
A2L_zn_ribbon
DUF7129
Auto_anti-p27
Zn_ribbon_19
Zn_ribbon_8
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QLC34479
LinkDB
All DBs
Position
1838419..1839396
Genome browser
AA seq
325 aa
AA seq
DB search
MSDSRTRERRRTESDEQERERSSEDELVCPECGGDLVSDEQHGETVCSECGLVVEEDDID
RGPEWRAFNSQEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLR
TWNERFRTRDSKERNLKQALGEIERMSSALGLPKNVRETASVIYRRALDEDLLPGRSIEG
VATAALYAAARQANTPRSLDEVTNVSRVDKDEIARTYRYVVRELKLEIAPADPTSYVPRF
VSDLDLGDEVERQARDLLEAAKEKGIYSGKSPVGLAAAAVYAAGLLTNERVTQNQVSEVA
NISEVTIRNRYHELLEAQDDVPVEA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcacgcacacgggagcgacggcggacggaatcggacgaacaggagcgcgag
cggtcgagcgaggacgaactcgtctgccccgagtgcggcggcgacctcgtcagcgacgaa
cagcacggggagacggtctgctcggagtgcggcctcgtcgtcgaggaggacgacatcgac
cgcggtcccgagtggcgggcgttcaacagccaggagaaggaccagaaatcgcgcgtcggc
gccccgacgacgaacatgatgcacgacaaggggctctcgacgaacatcggctggcaggac
aaggacgcctacggcaactccctctcgagccgccagcgccagaagatgcagcgcctccgc
acctggaacgagcgcttccgcacgcgggactcgaaggagcggaacctgaagcaggcgctc
ggcgaaatcgagcgcatgagctccgccctcggcctcccgaagaacgtccgggagacggcg
tccgtcatctatcggcgcgccctcgacgaggacctcctccccgggcgctccatcgagggc
gtcgccaccgccgcactctacgccgccgctcggcaggcgaacacgccgcgctcgctcgat
gaggtgacgaacgtctcgcgcgtcgacaaagacgagatcgcgcgcacctaccgctacgtc
gtccgcgagctcaaactcgaaatcgcgcccgccgacccgacgagctacgtcccgcgcttc
gtcagcgacctcgacctcggcgacgaagtcgaacgccaggcccgcgacctgctcgaggcc
gccaaggagaagggcatctactccgggaagtcgccggtcggcctcgccgccgccgccgtc
tacgcggccggcctcctcaccaacgagcgcgtgacgcagaaccaggtgagcgaggtggcg
aacatcagcgaggtgaccatccgcaaccgctatcacgaactcctggaggcccaagacgac
gttcccgtcgaagcctga
DBGET
integrated database retrieval system
