Halarchaeum sp. CBA1220: EFA46_010260
Help
Entry
EFA46_010260 CDS
T06674
Name
(GenBank) CDC48 family AAA ATPase
Organism
halr
Halarchaeum sp. CBA1220
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_33
AAA_5
CDC48_2
AAA_22
AAA_2
TIP49
AAA_lid_PRS2_C
AAA_14
AAA_28
DUF815
nSTAND3
IstB_IS21
RNA_helicase
Mg_chelatase
Parvo_NS1
AAA_18
TsaE
AAA_25
NPHP3_N
AAA_24
AAA_7
Zeta_toxin
Sigma54_activat
NACHT
AAA_3
AAA_30
AAA_19
AAA_17
AAA_11
DUF5906
SLFN-g3_helicase
ABC_tran
Sigma54_activ_2
NB-ARC
bpMoxR
NTPase_1
Cytidylate_kin2
MazE_antitoxin
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QLC34570
LinkDB
All DBs
Position
complement(1928550..1930646)
Genome browser
AA seq
698 aa
AA seq
DB search
MSEDSGRRLVVREAAPRDAGRGIVRLPDAVRRDLGVLSGDTVRIVGAGATVAKVWPDATL
DADELRIDGATRANAGVSVGETVRVEKATVREAERVVVTPSVPPARERAAVEDAVRDALF
DRPVSEGETVRVDALGEIGEFRVTHTDPGSDVVVTGETSVEVAVEEPGAGANADADAGDG
AGVGVTYEDVGGLGEELAAVRELVELPLTDPGRFRRMGVEPPKGVLLYGPPGTGKTLIAR
AVANEVDAHFVSVSGPEITSKYKGESEEQLREVFEEAREHAPSIVFFDEFDAIAGERDDA
GDMENRIVGQLLSLMDGLEGRGEVVVIGATNRVNAIDPALRRGGRFDREIEIGVPSRGGR
AEILDVLTRGMPLADDVDLGTFADRTHGYVGADLRALVTEAAMAAIRDDRDTVTRADLET
AFASTDPSAMREVVAESPDVSFDDIGGLEDAKATLREAVQWPLQYASLFEAAHTDPPTGV
LLYGPPGTGKTMLARAIGHESGVNVVRVAGPELVDKYVGESEKAVREVFERARRTAPCVV
FFDEIDAVASARGPDTSESTERVVSQLLTELDAAAENPNLVVLAATNRRDALDPALLRPG
RFETHVHVPRPDEAARRAVLGVHAREKPLAEDVDLDAVAERTDGYTGADLAAVVRAAALD
AIRDTVDAHPEDAADHPEDVRIRGRHFEDALERYAASR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggattcgggtcgccgactcgtcgtccgcgaggccgcgccccgcgacgccggg
cgcggcatcgtccgcctcccggacgccgtcagacgcgacctcggggtgttgagcggtgac
accgtccgcatcgtcggcgcgggcgcgaccgtcgcgaaggtgtggccggacgcgacgctc
gacgcggacgaactccgcatcgacggcgcgacgcgcgcgaacgctggcgtctcggtgggc
gagaccgttcgcgtcgagaaggccaccgtccgcgaggccgagcgcgtcgtcgtgacgccg
tcagtcccgcccgcgcgcgagcgagccgccgtcgaggacgcggtgcgcgacgccctcttc
gaccggccggtgagcgagggcgagaccgtccgcgtggacgcgctcggcgagatcggcgag
ttccgcgtcacgcacaccgacccggggtcggacgtcgtcgtcaccggcgagacgagcgtc
gaggtcgcggtcgaagaaccgggcgcgggcgcgaacgcggacgccgacgcgggcgacggg
gcgggcgtcggcgtcacctacgaggacgtcggcggcctcggcgaggagctcgccgccgtc
cgcgaactcgtcgaactccccctcaccgacccggggcgattccgccggatgggtgtcgaa
ccgccgaagggcgtcctcctctacggcccgccgggcacggggaagacgctcatcgcgcgc
gccgtcgcgaacgaggtggacgcgcacttcgtgagcgtctccggccccgagatcacctcg
aagtacaagggcgagtccgaggagcagctgcgcgaggtgttcgaggaggcgcgcgagcac
gcgccgagcatcgtcttcttcgacgagttcgacgccatcgcgggcgagcgcgacgacgcg
ggcgacatggagaaccgcatcgtcggccagctcctcagcctcatggacggcctcgagggc
cgtggcgaggtcgtcgtcatcggcgcgacgaacagggtcaacgccatcgaccccgcgctc
cggcgcggcgggcgcttcgaccgcgagatcgagatcggcgtcccctcgcgcggggggcgc
gcggagatactcgacgtcctcacgcgcgggatgccgctcgccgacgacgtcgacctcggg
acgttcgcggaccgcacgcacgggtacgtcggcgcggacctgcgcgcgctcgtcacggag
gcggcgatggcggcgatccgcgacgaccgcgacaccgtgacgcgcgccgacctcgagacg
gcgttcgcctccacggacccgtccgcgatgcgcgaggtcgtcgcggagtcgccggacgtc
tccttcgacgacatcggcggcctcgaggacgcgaaagccaccctccgtgaggccgtccag
tggccgctccagtacgcctcgctcttcgaggccgcgcacaccgacccgccgacgggcgtc
ctcctctacggcccgcccggcaccgggaagacgatgctcgcgcgcgccatcggccacgag
agcggcgtgaacgtcgtccgcgtcgccggtcccgaactcgtcgacaagtacgtcggcgag
tccgagaaagcggtcagggaggtcttcgagcgcgcgcgacgcaccgcgccctgcgtcgtc
ttcttcgacgagatcgacgccgtcgcgagcgcgcgcggcccggacacgagcgagtcgacc
gagcgcgtcgtcagccaactcctcaccgaactcgacgcggcggccgagaacccgaacctc
gtcgtgctcgccgcgaccaaccgccgcgacgccctcgaccccgcgctcctccgccccggg
cgcttcgagacgcacgtccacgtcccgcgacccgacgaggccgcccgcagggccgtcctc
ggggtgcacgcccgcgagaaaccgctcgccgaggacgtggacctcgacgccgtcgccgag
cggacggacgggtacacgggtgcggacctcgccgccgtcgtccgcgccgccgccctcgac
gccatccgcgacaccgtcgacgctcaccccgaggacgccgccgaccaccccgaggacgtc
cgcattcgcggccgacacttcgaggacgcgctggagcgatacgcggcgtcccgatag
DBGET
integrated database retrieval system
