Halarchaeum sp. CBA1220: EFA46_010520
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Entry
EFA46_010520 CDS
T06674
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFA46_010520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halr03400
]
EFA46_010520
Enzymes [BR:
halr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EFA46_010520
DNA repair and recombination proteins [BR:
halr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EFA46_010520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
QLC34619
UniProt:
A0A7D5E0X5
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All DBs
Position
1970610..1971494
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AA seq
294 aa
AA seq
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MRSGSVPLVDLPGGFDLQATLESGQTYLWTREDGETYGDAAAYGGDAWYSTVVDGEVVRA
RQHDGALEWEATTDAESLLFELLRLDDDLDAIREGASDDPLIEEAYERYWGLRIVDDPFF
GCLISFICSAQMRVERIFGMQEALREAYGERIEFDGETYYAFPTPEALASASEQDLRELN
LGYRAPYVVRSAELVASGELTERDVRGADLEETRDALKGFVGVGDKVADCVALFSLGELE
AVPLDTWIRTAIEEYYPDCATGNYADTSRAIREAFGPNAGYTQTYVFHHLRNRE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccggctcggtcccactcgtcgacctccccggcggcttcgacctgcaggcgacg
ctggagagcggacagacctacctctggacccgtgaagacggcgagacgtacggcgatgcg
gccgcctacgggggcgacgcgtggtacagcaccgtcgtcgacggcgaggtggtgcgcgcc
cgccagcacgacggcgccctcgagtgggaggccacgacggacgccgagtcgctcctcttc
gagctcctgcgactcgacgacgacctcgacgcgatccgagagggggcgagcgacgacccc
ctcatcgaggaggcctacgagcgctactggggcctgcgcatcgtcgacgaccccttcttc
ggctgtctgatctccttcatctgctcggcgcagatgcgcgtcgagcgcatcttcgggatg
caggaggcgctgcgcgaggcgtacggcgagcgcatcgagttcgacggcgagacctactac
gcgttccccacaccggaggcgctcgcgtcggcgagcgagcaggacctccgcgagttgaac
ctcggctatcgggcgccctacgtcgtccggagcgccgagttggtcgcgagcggcgagctc
accgagcgcgacgtccggggcgccgacctggaggagacccgcgacgccctcaaggggttc
gtcggcgtcggtgacaaggtcgcggactgcgtcgcgctcttctccctgggtgaactcgag
gcggtgcccctcgacacgtggatccgcaccgccatcgaggagtactaccccgactgtgcg
accgggaactacgcggacacctcgcgggcgatccgcgaggcgttcggcccgaacgccggt
tacacgcagacatacgtcttccatcacctccggaatcgcgagtag
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