Halarchaeum sp. CBA1220: EFA46_012045
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Entry
EFA46_012045 CDS
T06674
Name
(GenBank) PGF-pre-PGF domain-containing protein
KO
K20276
large repetitive protein
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EFA46_012045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARDB
Big_7
Big_3_3
PKD
HYDIN_VesB_CFA65-like_Ig
TIG
DUF4175
FixH
Motif
Other DBs
NCBI-ProteinID:
QLC34982
LinkDB
All DBs
Position
pCBA1220-01:complement(316377..323366)
Genome browser
AA seq
2329 aa
AA seq
DB search
MSHNADTARRTIGVFLVLLVVASPVASGVTLATSGGGAGGSTAALSTPAGYGDVSDTEKY
ALTNNTSVWERSIFPLRAGSGAAAHTSLGPGIELSVPQATKQLNKHFSVYETGTTVPMTF
RPSRAQASESDFDGEDAQLVALRLPTDAEAPTTPSALRDLLGNDSEAEATMVADRPFNIT
TEQRGDTTVTQDVFDFSPTQPGQYVLVLASPDGNASGYSVANGALEQDGQVTVVGFDAVM
VRNHASSVSAPTDATVGSNVTFDVDANTAPASNVSQMVLLYDNETLWASSSTITLSDVSG
DVNASVETGISEVNGDFRVVGSPSAFGMNATEQRVSYPVSAQALFDFLAENRDFGENTTV
TNSSDAVALNATGTLAEMNASGTVNVSVPGDWPAGDYHWIHVSSAADGADVSSSQGSLTL
REGVDLNVSANATSVVRGGDVAFTVTRADTGEGVNATLTIDGATYETDANGTYVHTFESG
GTYTVSATRANTDTTVFASDETTVDVAASAIAVSNLSAPSVVLQNETFAVNATLRNTGDA
EGTRTVNLTVNGTTVESATRTLGPGENATVSFDYAFTAGERGPVTLGVGEASADVRVDAP
ATFEYSALSVQPTTVATNETVNASVTVRNTGDRDGDTVVTLTANGTTIDERQIALDAGNE
TTVDFSTAFESPGTYAVSAGGLPARTVTVLEPASFTYSNLTVAPDTVDAGASASVSVTVS
NTGGIGGIDTVTLAEDGQNVTNASVYVDAGASETVTFERVYTEPGTQTLGVGDRTTTLNV
TAVDAVPPSVVLTEPSTGDVAYGATLSFRVRDETTNVTDVTVNATTSNGTVERVDLLDAA
NATNDTTVGVDTDGWHEGDATVNVTAVDAEGNAVTKTYRFDLVSAPVFTGVSPTTESGET
PTVTVTYADDGPAPEHAESGINASSATLFVDGTPVAFDGVGPTEASVTLDALASGTHSLK
AVVADDANHTSARTWTLDVDADAPTVNVTPRNDVVSDGSPFEAAVVANDPALANATVAYA
NETAVVHTETVTDRARLTDGAIETTWDGRSGGAFVPDGTYTVTVNASDAYGHTATANATL
RVDTTGPTVTDAAVTPNATNATGTVTANATFADPADVTSATYVLRKVGTGVRVSNTTTDD
VTSATFDASNFVVDGDYRLTVVAVDDAANRNTTATNATVAVDSTPPALAASIARHGTNGT
VTVATPSGEDVANLTGTVEHDGTTTELTNFTPAGDGSYNATFNASSDGVYNVTVRGEDDA
ENVGNASASAEIRTVSGQSNVTVYLEDSGIVAELNLTTTVDQGFYSMSGSDRPSQSLPSN
ASSVSTLVGQVSQSIDGNITTGSTIAFPAPGAANANGGSPFTVQYYDAENESWERYDTKR
VENYTVSDDAGNEIVNGTYGVANVSHFSTYTATSIDDTPPTVEFESLNAPANATAAWVNA
NITDDSGVNASTVTLAWNGSDVTGEASVTETPNGNATVAYEATGLEPGASYDVTVSANDT
NANANTTNATFTVDPDTADPTATIDSPSDNATFPAGTESVALNATFGDADSGVADVNATL
DGTTLSGVNLTAGTFNATVSPDTGEHAFALAVTDRAGNVTETSVDFTISADTAGPVVNVS
SPVDGKTYANATTSVPLIANATDLASGVDSVTVLVDGTDVTGDANTTDYTNVTYDVPVTP
GSTHTVNVSATDGAGNANWTNATFSVAPDEDAPDVTVAPDDDTTFPSDTVSVNATVTYFD
ALSAIDPADVTLQVDGTTVSANENATLTLKNETRANVTVSNLSTGSQHSIIATVTDAAGN
TEQVSATFSVAEGSQLQVTRAGVAAASLNADGGVTAGENVTVTADVANVGDEPGERDIAL
RQNGTDVASQTVTLNAGATTTLAFERTLGTPGTYAFAVGETSAGTVSVDANYSVTGSVNA
TSLTEGDDVTVTVTGTNELASAQTVTVTVAVPNASLSTPVSLDLPASGQNSTTVAFSDLP
AGTHDVLVGGQVVDTLDVAAASDGSTPTVPDESDDTTDESDDSADDDDDSTPAPPVNEPT
VTRTVNAGAVTVDVTNVPDNGTVDVPANTTGTNPNATLSGFKIGLNGTAETTFTLSNDTG
STPALDAGDPISYFNISHEVAEENIATVTFTFTVTASELDARGLSTSQVALYRHHEGAWN
ALETSFVSRDGDTLTFEATSPGLSVYAVGGSPAEFAVTDATVDTTEPSTGESVTVRATVE
NTGGSAGEYTVPLVVDGATVDERTVSLDANEETTVTFEHAFESTGSHSVAVDDADAGSVS
VSEGSNAQQGSTTTPVSSQGDFPVVPVLVMLVVIALIVVGLYVYREDQR
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaacgctgataccgccaggaggacaatcggggtcttcctcgtcctcctggtc
gtcgcctcccccgtcgcgtcgggtgtcaccctcgcgacgagtggtggcggagcgggcggc
agcaccgccgccctctccacaccggcgggatacggcgacgtctcggataccgagaagtac
gcactgacgaacaacacgagcgtctgggaacgctctatcttcccgcttcgtgccggtagt
ggcgcggcggcacacacgtcgctcggcccgggaatcgagttgagcgtcccccaagcgacg
aagcaactgaacaagcacttctccgtctacgaaaccgggacgacggttccgatgacgttc
cgaccgtcgcgcgcacaggccagcgagagcgacttcgacggtgaggacgcgcagctcgtc
gcgctccgcctcccgacggacgccgaggcaccgacgacgccgtcggcgctccgcgacctc
ctcgggaacgactccgaggctgaggcgacgatggtcgccgaccggccgttcaacatcacg
acggagcaacggggcgacacgacggtcacccaggacgtcttcgacttctcgccgacgcag
cccggccagtacgtcctcgtcctcgcgagccccgacgggaacgcgagcgggtactcggtc
gccaacggcgcgctcgaacaggacggacaggtgacggtcgtcggcttcgacgccgtgatg
gtccggaaccacgcctccagcgtgagcgccccgacggacgcgacggtcgggtcgaacgtc
accttcgacgtcgacgcgaacaccgcgcccgcgtcgaacgtctcccagatggtcctgctc
tacgacaacgagaccctctgggcgtcgagctcgaccatcaccctctccgacgtctccggt
gacgtgaacgcgagcgtcgagaccggcatctccgaggtgaacggcgacttccgcgtcgtc
gggtcgccgagcgcgttcgggatgaacgccacggagcagcgcgtctcctaccccgtgagc
gcgcaggcgctcttcgacttcctcgccgagaaccgcgacttcggtgagaacacgacggtg
acgaacagcagcgacgccgtcgcgctgaacgccaccggcacgctcgcggagatgaacgcg
agcgggacggtgaacgtctccgtgcccggcgactggccggccggcgactaccactggatc
cacgtgagctccgccgccgacggcgcggacgtctcgagctcgcagggttcgctcacgctc
cgcgagggcgtcgacctgaacgtcagcgcgaacgccacgtcggtcgtgcgcggcggcgac
gtcgcgttcaccgtcacccgcgccgacacgggcgagggcgtgaacgcgacgctcaccatc
gacggcgcgacgtacgagacggacgcgaacggcacctacgtccacaccttcgagtcgggc
gggacctacaccgtgagcgcgacgcgcgcgaacacggacacgacggtcttcgcgtccgac
gagacgaccgtggacgtcgcggcgtccgcgatagccgtctcgaacctcagcgcgccgagc
gtcgtcctccagaacgagacgttcgcggtgaacgcgacgctccggaacaccggtgacgcc
gagggcacccgaacggtgaacctcaccgtcaacggcaccaccgtcgagagcgccacgcgg
acgctcggccccggcgagaacgcgacggtctccttcgactacgccttcacggccggcgag
cgcgggcccgtcaccctcggcgtcggcgaggcgtccgccgacgtccgcgtcgacgcgccg
gcgaccttcgagtactccgcgctctccgtccagccgacgaccgtcgccacgaacgagacg
gtgaacgcgtcggtgaccgtccggaacaccggtgaccgcgacggcgacacggtcgtcacc
ctcaccgcgaacggcacgactatcgacgagcgccagatcgcgctcgacgccgggaacgag
acgaccgtcgacttctcgacggccttcgagtcgcccggtacgtacgccgtcagcgccggc
ggcctgcccgcgcggacggtcacggtcctcgaacccgcgagcttcacctacagtaacctc
accgtcgcgcccgatacggtcgacgcgggcgcgagcgcgagcgtctccgtcaccgtctcg
aacaccggcggtatcggcggcatcgacaccgtgacgctcgccgaggacggccagaacgtc
accaacgccagcgtctacgtggacgcgggcgcgagcgagacggtgacgttcgagcgcgtc
tacaccgagcccggcacgcagacgctcggcgtcggtgaccgcacgacgacgctgaacgtc
accgccgtcgacgccgttccgccgagcgtcgtcctcacggagccgtcgaccggtgacgtc
gcctacggcgcgacgctctccttccgcgtgcgcgacgagacgacgaacgtcacggacgtc
acggtgaacgcgacgacgtccaacggcaccgtcgagcgcgtcgacctcctggacgcggcg
aacgcgacgaacgacaccaccgtcggcgtcgacaccgacggctggcacgagggcgacgcg
accgtgaacgtcaccgcggtcgacgccgagggcaacgcggtcacgaagacctaccgcttc
gacctcgtctccgcgcccgtcttcacgggcgtctcgccgacgaccgagtccggcgagacc
ccgaccgtcaccgtgacgtacgccgacgacgggcccgcgcccgagcacgcggaatccggc
atcaacgcctcgagcgcgaccctcttcgtcgacggcacacccgtcgccttcgacggcgtc
ggtccgacggaggcgagcgtcacgctcgacgcgctcgcgtccggcacgcacagcctgaaa
gccgtcgtcgccgacgacgcgaaccacacgagtgcgcgcacgtggacgctcgacgtggac
gcggacgcgcccacggtgaacgtcacgccacgcaacgacgtggtgagcgacgggtcgccg
ttcgaggcggcggtcgtcgcgaacgacccggcactcgcgaacgcgacggtcgcctacgcg
aacgagacggcggtcgtgcacacggagacagtcaccgaccgcgcgcgcctcactgacggg
gcaatcgagacgacgtgggacggccgcagtggcggcgccttcgtccccgacggcacgtac
accgtgaccgtgaacgcgagcgacgcctacggccacaccgcgaccgcgaacgccaccctc
cgcgtcgacacgaccgggccgacggtcacggacgcggcggtgacgccgaacgcgacgaac
gcgaccggcaccgtcacggcgaacgcgacgttcgccgaccccgccgacgtgacgagcgcg
acctacgtcctccggaaggtgggcacgggcgtgcgggtgagcaacacgacgaccgacgac
gtgacgtccgcgacgttcgacgcgagcaacttcgtcgtcgacggcgactaccgcctcacc
gtcgtcgcggtcgacgacgcggccaaccggaacacgacggcgacgaacgcgaccgtcgcc
gtcgactcgacgccgcccgcgctcgccgcgagcatcgcgcggcacggcacgaacggcacc
gtgacggtcgcgacgccgagtggcgaggacgtcgcgaacctcaccggaaccgtcgagcac
gacgggaccacgaccgaactcacgaacttcacccctgccggtgacgggtcgtacaacgcg
acgttcaacgcctcgagcgacggcgtctacaacgtcaccgtgcgcggtgaggacgacgcc
gaaaacgtcgggaacgcgagcgcgagcgcggagattcggacggtgagcgggcagagcaac
gtcaccgtctacctcgaggactccggcatcgtcgccgagctgaacctcaccacgacggtc
gatcagggcttctactcgatgtccggaagcgaccggccgtcccagtccctcccgtcgaac
gcgtcgagcgtctcgacgctcgtcgggcaggtcagccagagcatcgacggcaacatcacg
accggctccaccatcgcgttccccgcgccgggcgccgcgaacgcgaacggcgggagcccc
ttcaccgtccagtactacgacgcggagaacgagtcgtgggagcgctacgacactaagcgc
gtcgagaactacaccgtgagcgacgacgccgggaacgagatcgtgaacggcacctacggg
gtggcgaacgtcagccacttctcgacgtacaccgcgacgtcgatagacgacaccccgccg
accgtcgagttcgagtcgctgaacgcgcccgcgaacgcgacggccgcgtgggtgaacgcg
aacatcaccgacgacagcggcgtgaacgcgagcaccgtcacgctcgcgtggaacgggagc
gacgtcaccggcgaggcgtccgtcaccgagacgccgaacgggaacgccaccgtggcgtac
gaagcgaccggcctcgaacccggcgcgtcctacgacgtcaccgtgagcgcgaacgacacg
aacgcgaacgcgaacacgacgaacgcgacgttcaccgtcgacccggacaccgccgacccg
acggcgaccatcgactcgccgagcgacaacgcgacgttccccgccggcacggagtcggtg
gcgctgaacgcgacgttcggcgacgcggactccggcgtcgcggacgtgaacgcgacgctc
gacggcacgaccctctccggtgtgaacctcacagcgggcacgttcaacgccaccgtctcg
ccggacacgggcgagcacgcgttcgccctcgccgtcaccgaccgcgccgggaacgtgacc
gagacgagcgtcgacttcaccatcagcgcggacaccgccggtccggtcgtcaacgtcagc
tcgccggtcgacgggaagacgtacgcgaacgccacgacgagcgtgccgctgatcgcgaac
gcgaccgacctcgcgtccggcgtcgactccgtcaccgtcctcgtcgacgggacggacgtc
acgggcgacgcgaacacgacggactacacgaacgtcacgtacgacgttccggtcacgccc
gggagcacgcacaccgtgaacgtgagcgcgaccgacggcgccgggaacgcgaactggacg
aacgccacgttcagcgtcgcgcccgacgaggacgcgcccgacgtgaccgtcgcgcccgac
gacgacacgacgttcccgagcgacacggtgagcgtgaacgcgaccgtgacctacttcgac
gcgctctccgccatcgacccggcggacgtcacgctccaagtcgacggcacgacggtgagc
gcgaacgagaacgcgacgctgaccctgaagaacgagacgcgcgcgaacgtcaccgtctcg
aacctctccacggggtcgcagcacagcatcatcgcaaccgtcaccgacgccgccgggaac
accgagcaggtgagcgccaccttctcggtcgccgagggctcgcagctccaggtgacgcgc
gcgggcgtcgccgccgccagcctcaacgcggacggcggcgtcaccgccggcgagaacgtc
accgtcaccgccgacgtggcgaacgtcggcgacgaacccggcgagcgcgacatcgccctc
cggcagaacggcacggacgtcgcttcacagaccgtcacgctgaacgccggcgcgacgacg
acgctggcgttcgagcgcacgctcgggacgcccgggacgtacgcgttcgcggtcggcgaa
acgagcgccggcacggtctccgtcgacgcgaactacagcgtcaccgggagcgtgaacgcg
acgtcgctcaccgagggcgacgacgtcaccgtcaccgtcaccgggacgaacgagctcgcc
tcggcgcagacggtgaccgtcacagtcgcggtgccgaacgcctcgctctccacgccggtg
tccctcgacctcccggcgagcggccagaacagcaccaccgtggcgttcagtgaccttccc
gccgggacgcacgacgtcctcgtcggcgggcaggtcgtcgacacgctcgacgtcgccgcc
gcgagcgacggctcgacaccgaccgtccccgacgagagcgacgacacgaccgacgagagc
gatgactcggcggacgacgatgacgactcgacgcccgccccgccggtgaatgaaccgacg
gtcacgcgcacagtgaacgcgggcgccgtcaccgtcgacgtcacgaacgtccccgacaac
gggacggtcgacgtcccggcgaacaccaccggaacgaacccgaacgcgacgctcagcggc
ttcaaaatcgggctgaacggcacggccgagacgacgttcaccctctcgaacgacacgggt
tcgacgccggcactcgacgccggtgacccgatcagctacttcaacatcagccacgaggtc
gccgaggagaacatcgccaccgtgaccttcaccttcaccgtcacggcgagcgagctcgac
gcgcgcggcctctcgacctcgcaggtcgcgctctaccgccaccacgagggcgcgtggaac
gccctcgagacgtccttcgtctcccgcgacggcgacacgctgaccttcgaggcgacgtcg
cccggcctctccgtctacgcggtcggcgggtcgcccgccgagttcgcggtgacggacgcc
acggtcgacaccaccgagccgtccacgggcgagtcggtgacggtgcgcgccaccgtcgag
aacaccggcggctccgccggcgagtacaccgtcccgctcgtcgtcgacggcgccaccgtc
gacgagcggaccgtctccctcgacgcgaacgaggagacgacggtgaccttcgagcacgcc
ttcgagtccaccgggagccactccgtcgccgtcgacgacgccgacgccggcagcgtcagc
gtctccgagggctcgaacgcccagcagggctcgaccacgacgcccgtctccagtcagggc
gacttcccggtcgtgcccgtcctcgtgatgctcgtcgtcatcgccctcatcgtcgtcggc
ctctacgtctaccgcgaggaccagcgctag
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