KEGG   Halarchaeum sp. CBA1220: EFA46_012405
Entry
EFA46_012405      CDS       T06674                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
halr  Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:halr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:halr02048]
    EFA46_012405
Enzymes [BR:halr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EFA46_012405
Prokaryotic defense system [BR:halr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    EFA46_012405
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD DEAD ResIII HD
Other DBs
NCBI-ProteinID: QLC35052
LinkDB
Position
pCBA1220-01:complement(391877..394486)
AA seq 869 aa
MALDPEARYSHPPEDGRDGVLLTDHLTDVAERVPQVVPAGATTPAGESLRDVVRLLALVH
DLGKATTFFQRYIDSGRRDPENDLKRYHAPLGAFAAFDVCERAGFDAETCLAGFVAVAKH
HGRLPDVADYVTKRTDASRHGGDRRLDALAHQVVDIHEHDASQTLARAVYADATGVADDW
TAFATAVVEDDALVERIAGHVATDGHPVRDALSEDCYALVLQCWSALVLADKTSAADAPS
DAATYAPEHPDFETLDAHVAALEADADADPDGTRRERLNHFRSRARRDVLDSVPDVAESG
GGVATLTLPTGMGKTLTGLSAAFALRDRLDGERVVYALPFTSVIDQVVADVEGIYDTDAG
TRLLTAHHHLTETTLRGDEEGDADDADLSDDVAGMLAEAWRAGLTVTTFVQLFESLAGPQ
NTQSMKLPALHDAVIVLDEPQSLPLDWWKLAPRLVDVLTERYDATVVAMTATQPRLFDDA
TELVDDPDSYFAAVDRVDYALDDSAERYLDGGTDEPPKSHADAAADLLDTVAAGESALAV
CNTIGSAAELTACVDARLPDVVDVGERYADALADAGTPDDVRATELAETVARTGRPALLH
LSTRLRPADRLALVDVAKELTSRDLPFLTVSTQLVEAGVDISFDRVYRDLAPMDSVVQAA
GRCNRSFERERGRVTVWWLEHPGDGETTPSHAVYNRGPAVLTETARAIEAARSDDGVLDE
TAVARDAVEAYYERLGADGRDVGEQTYADYVDDARADELGRLSLIDQRRSVDVLVCRTAA
DRERAEAIREAERAYEFDALERHLEETRARRVSVPVYRGDDETADAITRLPPLLPEDGLY
ELDVRDFSNYFDATTGFTIPESSVDHQFL
NT seq 2610 nt   +upstreamnt  +downstreamnt
atggcgctcgacccggaggcgcgctactcccacccgcccgaggacggccgcgacggcgtc
ctcctcaccgatcacctcacggacgtcgccgagcgcgtcccgcaggtcgtgccggcgggc
gcgacgacgccggccggcgagtcgctgcgcgacgtcgtccgactgctcgcgctcgtccac
gacctcggaaaggcgacgacgttcttccagcgctacatcgactcgggacgacgcgacccg
gagaacgatctgaagcgctaccacgccccgctcggggcgttcgccgcgttcgacgtctgc
gagcgcgccggcttcgacgcggagacctgcctcgcgggcttcgtcgccgtcgcgaaacac
cacggccgactcccggacgtcgcggactacgtcacgaagcgaacggacgcgagtcgccac
ggtggtgacaggcgcctcgacgcgctcgcacaccaagtcgtcgacatccacgagcacgac
gcgtcgcagacgctcgcacgcgcggtctacgcggacgcgaccggtgtcgcggacgactgg
acggcgttcgcgacggccgtcgtcgaggacgacgccctcgtcgagcgcatcgctggccac
gtcgcgaccgacggccaccccgtccgggacgccctctcggaggactgttacgcgctcgtc
ctccagtgctggagcgcactcgtgctcgcggacaagacgagcgccgcggacgcaccgtcc
gacgcggcgacgtacgcgcctgagcacccggacttcgagacgctcgacgcgcacgtcgcc
gccctcgaagcggacgccgacgccgacccggacggcacgcgacgcgagcgtctcaaccac
ttccgctcgcgcgctcgccgtgacgtccttgacagcgttcccgacgtcgccgaatcgggc
ggtggcgtcgcgacgctcacactcccgacggggatggggaagacgctcaccgggctctcc
gcagcgttcgctctccgggaccgactcgacggtgagcgcgtcgtctacgcgcttccgttc
acgagcgtcatcgaccaagtcgtcgcggacgtcgaggggatttacgacacggacgcgggg
acgcgactcctcaccgcacaccaccacctcacggaaaccacgcttcgcggcgacgaggag
ggtgacgccgacgacgcggacctgagcgacgacgtcgcggggatgctcgccgaggcatgg
cgcgccggcctcaccgtgacgacgttcgtccaactcttcgagagcctcgccggcccgcag
aacacgcagtcgatgaaactcccggcgctccacgacgccgtcatcgtgctcgacgaaccc
cagagccttccgctggactggtggaagctcgccccgcgactcgtcgacgtgctcaccgag
cgctacgacgcgacggtcgtcgcgatgaccgcgacccagccgcgactcttcgacgacgcg
accgaactcgtcgacgaccccgattcgtacttcgccgccgtcgaccgcgtcgactacgcc
ctcgacgactcggccgagcgctatctcgacggcgggacggacgaaccgccgaagtcgcac
gccgacgcggcggccgacctcctcgacaccgtcgcggccggcgagtccgcgctcgccgtg
tgcaacaccatcgggagcgcggcggaactcaccgcgtgcgtcgacgcccgactgccggac
gtggtggacgtcggcgaacgctacgccgacgcgctcgccgacgccgggacgccggacgac
gttcgtgcgacggagctcgccgagaccgtcgctcggacggggcgtcccgcgctcctccac
ctgtccacgcgcctgcgacccgccgaccgactcgccctcgtcgacgtcgcgaaggaactc
acgtcccgcgacctcccgttcctcaccgtctccacgcagctcgttgaggccggcgtcgac
atcagcttcgaccgcgtctatcgcgacctcgcgccgatggacagcgtcgtgcaggccgcc
gggcggtgcaatcgctcgttcgagcgcgagcgcggccgcgtcaccgtctggtggctggag
caccccggcgacggcgagacgacaccgtcgcacgccgtctacaatcgcgggcccgccgtc
ctcaccgagaccgcgcgcgccatcgaagccgcccgtagcgacgacggcgtcctcgacgag
acggcggtcgcccgcgacgccgtcgaagcgtactacgagcgactcggtgcggacggacgc
gacgtcggtgaacagacctacgccgactacgtggacgacgcgcgcgcggacgaactcggc
cgactctccctcatcgaccagcgccgcagcgtcgacgtcctcgtttgccggaccgccgcc
gaccgcgagcgcgccgaagcgatacgcgaggccgaacgcgcctacgagttcgacgccctc
gagcgccacctcgaggagacgcgcgcgcgtcgcgtctccgtcccggtctatcgcggcgac
gacgaaaccgccgacgccatcacccgtctccctccactcctcccggaggacggactctac
gagctcgacgtccgggacttctcgaactacttcgacgcgaccacgggcttcacgattccg
gagagcagcgtcgaccaccagttcctctag

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