KEGG   Halarchaeum sp. CBA1220: EFA46_012500
Entry
EFA46_012500      CDS       T06674                                 
Symbol
cas6
Name
(GenBank) CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
halr  Halarchaeum sp. CBA1220
Brite
KEGG Orthology (KO) [BR:halr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:halr02048]
    EFA46_012500 (cas6)
Prokaryotic defense system [BR:halr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    EFA46_012500 (cas6)
   Subtype I-D factors
    EFA46_012500 (cas6)
SSDB
Motif
Pfam: CRISPR_Cas6 RAMPs
Other DBs
NCBI-ProteinID: QLC35071
LinkDB
Position
pCBA1220-01:417932..418780
AA seq 282 aa
MRRVDLTLDPEGAFPVPTANGYQIYGAVLSALDDVDEDVSTRVHDSPIGSLTNSGLLGTF
DGSHRDHHKRVIRDETYDLKLGVADPRDQAVFQALADAFVFSGDTLELADGDFRVRDFAS
TNTTHEELLNEASQIVKQNHDTFEIEVRFEKPTCIKESGEITTMFPHRGSVFRSLLRKWS
STIPDERVDELDLAMTREDFETNLIEKPDAHTYETHSVLVNRGEDGGPILRQGFTADCTY
RFKGASEAIRTAVTALALFSEYAGVGGFVSRGCGTVSVEVEV
NT seq 849 nt   +upstreamnt  +downstreamnt
atgagacgggtcgacttgactctcgatcccgagggggcgttcccagtgccgactgcgaac
ggctaccagatctacggtgctgtcctctcggctctcgacgacgtcgacgaggacgtcagc
acgcgtgtccacgactctccgatcgggagtctgacgaacagcgggctcctcggaaccttc
gacgggagccaccgcgatcaccacaagcgcgtgatccgcgacgagacctacgacctcaag
ctgggcgtcgccgacccacgtgatcaggcggtcttccaagcgctcgccgacgcgttcgtc
ttcagcggcgacacgctcgaactcgccgacggcgacttccgcgtgcgcgacttcgcgagt
acgaacacgacgcacgaggaactcctcaacgaagcctcgcagatcgtcaagcagaaccac
gacaccttcgaaatcgaggtgcgcttcgagaagccgacctgcatcaaggagagtggggag
attacgacgatgttcccccatcgaggcagcgtcttccgctcgctcctccgcaaatggtcg
tcgacgatcccggacgagcgggtcgacgaactcgacctcgcgatgactcgcgaggacttc
gagacgaacctcatcgagaaacccgacgcgcacacgtatgagacgcacagcgttctcgtc
aatcgcggtgaagacggtggcccaatcctccgtcaggggttcaccgccgactgcacctat
cggttcaagggtgcaagcgaagccatccggacagcggtcacggcgctcgcgcttttcagc
gagtacgcgggcgtgggcgggttcgtctcacgtggctgtgggacggtctctgtggaggtg
gaagtgtga

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