Halarchaeum sp. CBA1220: EFA46_012615
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Entry
EFA46_012615 CDS
T06674
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_012615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_012615
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_012615
Prokaryotic type
Archaeal type
TFB
EFA46_012615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_24
HTH_3
HTH_AsnC-type
DUF6513
Motif
Other DBs
NCBI-ProteinID:
QLC35092
UniProt:
A0A7D5E1S0
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All DBs
Position
pCBA1220-01:448032..448967
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AA seq
311 aa
AA seq
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MATRDIYEGGEEDRGAITGRCPECEGRVLADGGELACTACGLVLEEGRFDHGAEPWFDAE
SGDTRRTGAPVTPARHDRGLSTEIGYGGDAHGNTLSGRKRRQLGRLRREHTRARWRTKAE
RNLAHACGEIDRLASALDLSRDVVEEACVLYRRAQRADLIRGRSIEAMSAGAVYAACRCR
GDTRTLEEVAGVAQCSRSDVTLGYRVLNRELGLDARVVQVGDHLARVASRVGVSRRVRER
AGGYLDVAEQAGATNGRHPGGVAAACCYLASEDVGAGLTQTAVAEAAGVATATVRARIGE
LREATSSVTHD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagagacatctacgaaggcggtgaggaggatcgtggagcgatcactgggcgc
tgcccggagtgtgaggggcgagtgctcgcggacggtggcgaactcgcgtgtacggcctgc
ggactcgtcctcgaggaggggcgcttcgaccacggcgccgagccgtggttcgacgccgaa
agcggtgacacgcgacggacgggcgcaccggtgacgcccgcgcgtcacgaccgcgggctc
tcgaccgaaatcgggtacggcggagacgcacacgggaacacgctctccgggcggaagcgt
cgacagctcggccgactgcgtcgcgaacacacccgggcgcgctggcggacgaaagccgag
cggaacctcgcgcacgcctgtggtgagatcgaccgcctcgcgagcgcgctcgacctctca
cgggacgtcgttgaggaagcctgcgtactctatcgacgcgcccagcgcgccgacctgatc
cgtgggcgctccatcgaggcgatgagtgccggcgccgtttacgcggcgtgtcgctgtcgc
ggggacacgcgaacgctcgaggaggtcgctggggtcgcgcaatgctcgcgctcggacgtg
acgctcggctatcgcgtcctcaaccgggagctcggcctcgacgcgcgcgtcgtgcaggta
ggcgaccatcttgcccgcgttgcctcccgggtcggtgtgagtcggcgtgtccgtgagcgc
gccggcggctatctcgacgtcgcggaacaggcgggcgcgacgaacggccggcatcccggt
ggcgtcgccgccgcctgctgctacctcgccagcgaggatgtcggcgcgggactgacgcag
acggcagtcgccgaggccgcaggcgtcgcgacggcgaccgtccgcgcacggatcggggag
ctacgggaagcgacgtcgtcagtgacccacgactga
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