Halarchaeum sp. CBA1220: EFA46_014610
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Entry
EFA46_014610 CDS
T06674
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_014610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_014610
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_014610
Prokaryotic type
Archaeal type
TFB
EFA46_014610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Sigma70_r4
Cas12f1-like_TNB
Cyclin_N
DZR_2
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QLC35474
UniProt:
A0A7D5E116
LinkDB
All DBs
Position
pCBA1220-02:267070..268023
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AA seq
317 aa
AA seq
DB search
MERPTRERSEEQAEQEQTGDETQHCPECESTNIITDQGERICEDCGLVLDDDQIDRGPEW
RAFNSQEKDQKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRTLDSKKRNRMNRLRKWQER
IRTKDAGERNLQFALSEMDRMASALGVPRSVREVASVLYRRALKEDLIRGRSIEGVATAS
LYAACRKEGIPRSLEEVTEVSRVDQKEIGRTYRYVAKELSLEMEPTDPKEYVPRFASDLD
VSEEVIAKANEIIDTSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVANVTEV
TIRNRYQEQIEAMGFET
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccgactcgagaacgcagcgaagagcaggccgagcaggagcagaccggcgac
gagacccagcactgcccggagtgtgagtcgacgaacatcatcaccgaccagggggagcgt
atctgcgaggactgcgggctcgttctcgacgacgaccagattgaccgcggcccggagtgg
cgcgcgttcaactcccaggagaaagaccagaagagccgggtgggcgcgccaaccacccaa
acgatgcacgataaggggctaaccacccagatcgactggaaggacaaagacgcctacggg
cggacgctcgactcgaagaagcgcaatcggatgaaccgcctccggaagtggcaggagcgc
atccggacgaaggacgcgggcgagcgcaacctccagttcgccctctccgagatggatcgc
atggcgtccgcactcggcgtcccccgctcggttcgcgaggttgcatcagttctctatcgg
cgtgcgctcaaggaggacctcatccgcgggcgctccatcgagggtgtcgccactgcctcg
ttgtatgcggcctgccgcaaggaggggatcccgcgctcgctcgaggaagtcacggaggtc
tcgcgggtcgaccagaaggagatcgggcgcacgtatcgctacgtcgccaaggaactctcc
ctcgagatggagccgaccgaccccaaggagtacgtgccgcgtttcgcgagcgaccttgac
gtctctgaggaagtcatcgcgaaggccaacgaaattatcgacacgtccgccgaacagggc
ctcctctccgggaagagccctactgggttcgcggcggccgcgatttacgccgcgagcctc
ctctgcaacgagaagaagacccagcgcgaggtcgccgacgtcgcgaacgttactgaggtc
actatccgcaatcgctatcaggagcaaatcgaagccatgggcttcgagacgtag
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