Halarchaeum sp. CBA1220: EFA46_015045
Help
Entry
EFA46_015045 CDS
T06674
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_015045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_015045
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_015045
Prokaryotic type
Archaeal type
TFB
EFA46_015045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF7129
DZR
HTH_Tnp_ISL3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QLC35624
UniProt:
A0A7D5HZM6
LinkDB
All DBs
Position
pCBA1220-02:362398..363318
Genome browser
AA seq
306 aa
AA seq
DB search
MASREIYANGFDEDVQTDDQTNGCPECGGRVETNTVETVCEECGLVLTEHAIDHSGEPVY
EEGTERTGAPLTTARHDRGLSTTIGWKRDANGNRLSTKKRRQLGRLRREQKRGRFRSKQE
RNLSHGLGEVQRVASVLDVDNSLQEQACQLFRSAHSEGLLPGRSIEAVAAASVYAACRCN
GRTLPLADVVEAARVGENRVTNAYATLNEELGLPAQPMQPHAYLPRLASNLDVPDEIRRQ
ARMLAERAEAKSLVQGVSPPGFAAACLYYVAQESEYRLTQAAVADAAGVTTTTIRTHRET
LRSELQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagagagatctacgcgaacggcttcgacgaggacgtccagactgacgaccag
acgaatggctgcccggagtgcggtgggcgagtcgagacgaacacagtagagacagtctgc
gaggagtgcggactcgtcctgacggagcacgcaattgaccatagcggggagccggtgtac
gaggaggggacggagcgaacaggtgccccactcacgacggcgcgccacgaccgtggactc
tcgacgacgatcgggtggaagcgcgacgcaaacgggaacagactctccacaaagaagcgt
cggcaactcggacggctacgtcgcgagcaaaaacggggtcggttccgttccaaacaggag
cgaaacctgagccacggactcggagaggtacagcgagtcgcgagcgtcctcgacgtcgac
aattcgctccaggagcaggcgtgccagctcttccggagcgcccactccgagggactcctc
ccagggcggtcaatcgaggcggtggcagcggcgagcgtctacgccgcctgccggtgcaac
ggccgaacccttccactcgcggacgtcgtcgaggccgcacgcgtcggtgagaatcgcgtg
accaacgcctacgcgacgctgaacgaggaactcggactgccggcgcagcccatgcagcct
catgcgtatctcccacgtctcgcctccaatctcgacgttccagacgagattcggcgacag
gcacggatgctcgcagaacgcgccgaggccaaatctctcgtgcagggggtgtcgccaccg
ggattcgctgcggcctgcctctactacgtagctcaggagagcgagtatcgacttacacag
gctgcagtcgcggacgccgcaggcgtcacgacaaccacgattcggacgcatcgtgagacg
ctccggagcgaactccagtag
DBGET
integrated database retrieval system
