Halarchaeum sp. CBA1220: EFA46_015800
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Entry
EFA46_015800 CDS
T06674
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFA46_015800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halr03021
]
EFA46_015800
Transcription machinery [BR:
halr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EFA46_015800
Prokaryotic type
Archaeal type
TFB
EFA46_015800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_24
BRF2-like_C_cyclin_rpt
HTH_AsnC-type
TackOD1
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QLC35717
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All DBs
Position
pCBA1220-03:complement(121947..122867)
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AA seq
306 aa
AA seq
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MATRDIYESGFDEDDGPISGRCPECEGRVLADGGELSCTECGLVLEEERFDHSAEPWYDP
DEETNSRRTGAPLTQARHDRGLSTEIGYGGDAHGNALSARKRRQLSRLRREHTRARWRSR
AEQNLAHACGEIARLGSALELSRDVVEEASVLYRRAHRENLIRGRSIETMSAGAVYAAVR
CRGDTRTLREVSAVAKCPHSDVAHGYSVLNTELGLDSQVVQVSDHLARVASHLNANRRVR
ERAGEYLNAAEDSGITNGRHPGGVAAACLYLASQDEDAGYTQTDVADAATVATATVRARI
TELQEK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctatgagagcgggttcgacgaggacgatggaccgattagtgga
cgctgcccagagtgcgaggggcgggtactcgcggacggcggtgaactctcctgtaccgag
tgtggtctcgttctggaggaggaacgcttcgaccacagcgctgaaccgtggtacgacccc
gacgaggagacgaattcgcgacgaacgggcgcgcctctcacgcaggcccgccacgaccgc
ggtctctcgaccgagatcggctacggtggcgacgcgcacggcaacgcgctctccgcccgg
aaacgccgacagctcagtcgactccgtcgcgaacacacgcgggcccgatggcgttcgaga
gccgaacagaacctcgcgcacgcctgcggcgagatcgcgcgtctcgggagcgcgctcgaa
ctcagtcgagacgtcgtcgaggaagccagcgtcctctatcgacgagcgcaccgagagaac
ctcatccgtggacggtctatcgagacgatgagtgcgggagccgtctacgcggcagtccgg
tgtcgtggcgatacacgcacgctccgcgaggtgagtgcggtcgcaaagtgcccacactcc
gacgtcgcgcacggctacagcgtcctcaacacagaactcggcctcgattcacaggtcgtc
caagtgagcgaccatctcgcccgggtggcctcccacctcaatgcgaaccgtcgtgtccgc
gagcgcgccggggagtacctcaacgccgccgaggactccggtatcacgaacggtcgacat
cccggaggtgtcgcggccgcctgcctctacctcgcgagtcaagacgaagacgcaggctac
acacagacagacgtcgctgacgccgcaaccgtcgcgacagccaccgttcgagcacgcatc
accgaactccaagagaagtga
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