Halocella sp. SP3-1: D7D81_00185
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Entry
D7D81_00185 CDS
T05769
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals00520
Amino sugar and nucleotide sugar metabolism
hals01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
D7D81_00185
Enzymes [BR:
hals01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
D7D81_00185
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_39
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
AZO93139
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Position
complement(41403..43874)
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AA seq
823 aa
AA seq
DB search
MNFQYINYDYGLPIKIFVNSPRNNFHLHDGLELIWVLDGELFVQIENKKIMLYNDDLLLV
NSFSNHRLNTGDDHKFLVMEIEKSFCQEYIADFNNKHFLLNSSNEKQQRYELIRFLFSRM
IDIYNKKTIEMLDNINNNLIKMLKYIEDNFTIDQGESQLSKFENSKYIIINEMIEHIKAN
YMNKITLKNIAEEKHYNTSYLSEKFKDFVGINFKDYVDIVRLYNVMKSILYKNENISDIA
YNNGFSSLKSFYRAFHRYYNCTPGEYRNLYRQTNNDQDDGGLYVHRKVKTYLDQGQLIQD
NKEEVLEKEITVNIDNTSGILKKSWQKIINIGSVYTILDSNVQAQIIEMQKDIGFEYLRF
EGIFNDEMEVCKLDENGDIYYNWKFVDKVFDFMFELKLKPFVCLSFMPDVLAKTNKKVFH
YRANASPPKKIKQWLDLVYSFFIHCINRYGMDSIEKWYFQIWGEFSFYNLHWDGTDEEYF
LFYKQTAEEIKKISKSIKIGPASENYYYGYRKSRNFLQFCQENNVPIDFYNANIYHNRIL
NEKDLDFNKADFFDDNTLLSVWFGYSDKMHTVDTAEETKDLLKDFYPHAEFMIVRWNMSW
DVKEYVHDTAFMATYVVDTALKAGQKVEGMGFLSLSDVLYEWPIDEGPFFGGSGLVNTEG
IKKPSYYAFWLLSKLGSTVVEQGDYYIVTKKSSDIQILVYNYSYLNNIYMKGNSKINQIS
KKNRYKVFERKDDMKLNLNIKGLKGKYKLRHYYLNREDGSAFDEWVELGCPYELNDEEIK
YLKIKSYPKMKIERVDCEKEYTVKTEIPVHGIELIVLNKIYEI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagtatattaattacgattatggtctgcctattaagatatttgttaattct
cccagaaataattttcatctccatgatggactagaattaatctgggtccttgatggggaa
ttatttgtacagattgaaaataaaaagattatgctttacaatgatgatttattattagtt
aatagttttagtaatcatagattaaatacaggtgatgatcataagtttttggtcatggaa
atagaaaagagtttctgtcaggaatatatagctgactttaataataaacattttttatta
aattcttctaatgaaaaacagcagagatatgaactgattcgatttttatttagtagaatg
atagatatttacaataaaaagacaatagaaatgctggataatataaataataaccttata
aagatgttaaaatatatagaagataattttactattgatcagggcgaatcccagcttagt
aaatttgaaaatagcaagtatattattattaacgagatgattgagcacattaaagccaat
tatatgaataaaataaccttaaaaaatattgctgaagaaaaacattataacacatcgtat
ttatctgaaaaatttaaagattttgttggcataaattttaaggactacgtagatatagtt
agattgtataatgtaatgaagtcgatactatataaaaatgaaaatattagcgacattgcc
tataataacggattttccagcctaaaaagtttttatagggcatttcatcgttattataac
tgtactcctggtgaatatagaaatttatatagacagacaaataatgatcaggatgatggg
ggtctttatgtacacagaaaagtcaagacatatttagatcaaggtcagcttattcaggat
aacaaggaagaggttttagagaaagaaattactgttaatatcgataatactagcggtata
ctgaaaaaatcatggcagaaaataataaacattggttcagtatatacaattttagattcg
aatgttcaggcccagattatagaaatgcagaaagatattggatttgaatatttaagattt
gagggtatatttaatgatgagatggaggtatgtaaactagacgagaatggagatatttat
tacaattggaagttcgtagataaggtttttgattttatgtttgaattaaaacttaaaccc
tttgtctgtcttagttttatgcctgatgtactggctaaaacaaataaaaaggtctttcat
tatagggctaatgcctctcctcctaaaaaaataaaacagtggcttgatcttgtttattct
ttttttattcactgtatcaataggtatggaatggacagtattgaaaaatggtattttcag
atatggggtgagttttctttctacaatctccactgggatgggacagatgaagagtatttt
cttttttataagcaaactgctgaagaaataaaaaagatatctaaatctatcaaaatcggc
cctgcttctgaaaattattattatggatatagaaaatcaagaaattttttgcaattctgt
caggagaacaatgtcccaatagatttttacaatgctaatatctatcataatcggatttta
aatgaaaaggatttagattttaataaggctgatttttttgatgataatacccttttaagt
gtctggtttggctattctgataaaatgcatacagtagatacagctgaagaaacaaaagat
ttgttaaaagatttttatccacatgctgaatttatgatagtcaggtggaatatgagctgg
gatgttaaagaatatgtccatgatacagcatttatggccacttatgttgttgatactgct
cttaaagcaggccaaaaggttgaaggaatgggttttctttctttatctgatgttttatat
gagtggccgatagatgaaggacctttttttggtggaagtggtctggtaaatacagagggg
attaaaaaaccatcatattatgctttttggctcctttcaaaattaggtagcacagtagtt
gagcaaggtgattattatatagttaccaaaaaaagttccgatattcagatacttgtctat
aattattcctatcttaataatatttatatgaaggggaatagtaaaattaatcagatctca
aaaaaaaatagatataaagtatttgagagaaaggacgatatgaagttaaatcttaatatc
aaaggtttaaagggaaaatataagcttagacattattatttgaatagggaggatggttct
gcttttgatgagtgggttgaacttggttgcccctatgaattaaatgatgaggaaattaaa
tatttaaaaataaaatcatatcccaagatgaagatagaaagagttgattgtgaaaaagaa
tataccgtaaaaacagaaataccggttcatggaatagaattgatagtgttgaataagata
tatgaaatataa
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