Halocella sp. SP3-1: D7D81_00380
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Entry
D7D81_00380 CDS
T05769
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
hals
Halocella sp. SP3-1
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hals03000
]
D7D81_00380
Transcription factors [BR:
hals03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D7D81_00380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
MarR
MarR_2
TetR_N
HTH_3
HTH_5
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
AZO93176
LinkDB
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Position
complement(92186..93190)
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AA seq
334 aa
AA seq
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MGNKTMEDIAKEARVSKSTVSRALGDDPRVNENTRKRIKKLAKKMNYQPHKAAQALANKN
TNVIGIVFPKIPRSIADPFFLEFLQGIGEVAVVSGYSLTLLNDSSDNNDYNKLEKIFHKH
NVDGIILTEPRTNDSRVTYLKKEGLPFVFLGNPMGDQDAYWVETDNRSGAYQAVDYLIKA
GHKRIATITGPMGLVAGKYRLQGYKDALLDKGLAVNPDFIINADFTQKGAYRAAKKLLLS
KDFTAIFAANDLMALGAIKALKEQGLTIPGDIAIMGYDGIQIGEFIDPPLTTISQPGKKM
GEIATELLLKLIQGEYISENHVLLSPELIVRDSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggtaataaaacaatggaagatatagcaaaggaagccagggtatcgaagtcaacagtt
tctcgggctctgggggatgaccccagggtaaatgaaaacaccagaaaaagaattaaaaaa
cttgctaaaaaaatgaattatcaaccacataaagcagcacaggccctagccaataaaaat
actaatgtgattgggatagttttccccaaaataccacgttcaatagcggacccctttttc
ctggagtttttacagggcattggagaggttgctgtagtaagtggatacagccttactcta
cttaatgatagcagtgataacaatgattataataagttggaaaaaatatttcacaaacat
aatgttgatggtattatcttaactgagcccaggactaatgactcaagggttacttatctt
aaaaaagaaggattaccatttgtttttttagggaatccgatgggggatcaggatgcttac
tgggtagaaacagacaatagaagtggtgcctatcaggcagtagattatttgattaaagct
ggtcataaaaggattgctacaatcactggacctatgggtttagtagcaggaaaatatcgt
ttgcagggttataaagatgctttgctagataaggggttggctgttaatcctgattttata
ataaatgctgattttacccagaaaggcgcctatcgtgctgctaaaaaattgctgctgagt
aaagattttactgctatatttgcagcaaatgacttgatggccctgggggcgattaaggcc
ctaaaagaacagggtttaacaataccaggagatatagctattatgggatatgatggcatt
cagattggtgagtttattgatcctccattaacaaccattagtcagccgggtaaaaagatg
ggtgagatagctacagagcttttattaaaattaattcagggggaatatataagtgaaaac
catgtcctgctttcacctgaattgatagtcagggactcagtataa
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