Halocella sp. SP3-1: D7D81_03330
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Entry
D7D81_03330 CDS
T05769
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals03030
DNA replication
hals03430
Mismatch repair
hals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7D81_03330 (holB)
03430 Mismatch repair
D7D81_03330 (holB)
03440 Homologous recombination
D7D81_03330 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hals03032
]
D7D81_03330 (holB)
03400 DNA repair and recombination proteins [BR:
hals03400
]
D7D81_03330 (holB)
Enzymes [BR:
hals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7D81_03330 (holB)
DNA replication proteins [BR:
hals03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D7D81_03330 (holB)
DNA repair and recombination proteins [BR:
hals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D7D81_03330 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
AbfS_sensor
Motif
Other DBs
NCBI-ProteinID:
AZO93700
LinkDB
All DBs
Position
705802..706785
Genome browser
AA seq
327 aa
AA seq
DB search
MGFKDIIGQDSAVELLVEQLKSRRVSHAFLFIGKDGVGKKRLALEFARALFCPEKEADAC
GICLSCKKVSHQNHPDIRLVEINEGDNIKIEQIRELQQEIAYKPYESDRKVFIIDQADQM
TVQAANSLLKTLEEPPSYALIILLVEETDSLLPTVISRCQKIQLNKLAREEIEKKLKSEG
VAPDKAEVIAGLADGSLGRALALLGDEEFLNSRQEVYSILYNLDKVDTVDLFKQADKLTT
YLNNGLPLFELILSLFRDIILYKQGNNNRIVNFDFIDDIKVMGKKYKIEELIGIVNLTNT
ISGYIRANVKKDLALQNLLLKIRAKRV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaagatataataggacaagatagtgcggttgagctcttagttgagcagtta
aaaagtcggcgggtatcccatgccttcctttttattggaaaagatggggttgggaaaaag
agactggctctggagtttgccagggcattgttttgccctgagaaggaggctgatgcctgc
ggcatttgcctctcctgtaaaaaggtgtctcatcaaaaccaccctgatattaggcttgtt
gagattaatgagggtgacaatatcaagatagaacagatcagagaactccagcaggagatt
gcttataaaccatatgaaagtgaccggaaggtatttattattgatcaggctgatcaaatg
acagtacaggcagctaacagtctgttgaagactctggaagaacccccttcctatgcgctt
ataattctgctggtagaagagactgatagtctgttacctacagttatttcgcgctgtcaa
aaaatccaactgaataagctggccagggaagaaattgaaaagaaacttaaatcagaggga
gtagcacctgacaaagcggaggtaatagctggtctagcagatggtagtcttggcagggct
ctggccctactgggagacgaggaatttttaaatagccggcaagaggtatacagtatatta
tataatttagataaggtggatacagtagatttatttaagcaggctgataaactgactact
tatctaaataacggcctgccattatttgagttgatattaagtctattcagggatataata
ttatataaacagggaaataataacaggatagttaacttcgattttattgatgatataaag
gtgatgggaaagaagtataagatagaggaattgatagggattgtaaacttgacaaatact
attagtggttatataagggctaatgttaaaaaagacttagccctacagaacttactactt
aagattcgagctaagagggtgtaa
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