Halocella sp. SP3-1: D7D81_08500
Help
Entry
D7D81_08500 CDS
T05769
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hals
Halocella sp. SP3-1
Pathway
hals03410
Base excision repair
hals03430
Mismatch repair
hals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7D81_08500 (recJ)
03430 Mismatch repair
D7D81_08500 (recJ)
03440 Homologous recombination
D7D81_08500 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hals03400
]
D7D81_08500 (recJ)
DNA repair and recombination proteins [BR:
hals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D7D81_08500 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D7D81_08500 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D7D81_08500 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
AZO94625
LinkDB
All DBs
Position
1791385..1793682
Genome browser
AA seq
765 aa
AA seq
DB search
MKTAINYQKDIYIPEWLERELDGNQLLARILLQRGINSQEKVKRFLDPEHYQATVPAEFP
GMEEAVDRILTAVKAKKKICIYGDYDVDGVTSTVILLDLLNKIKGQAVYHLPDRFKEGYG
MNKAVLRRLAGEVDLIITCDCGISNQEEIALAKELGLEVIVTDHHQLPDKLPPADLILSP
KLLAGDHQALNIPGAGMVYLLVVAILKRLGREEESKDFLDLLSLAIVADVVPLLEENRYL
LQLGLPELVNTKRPGLIELFKVAGIADPQNMTEEDIAFRIAPRLNSAGRILKADMAVELL
LVDEAFLARKKAIELEAVNQRRKKLQDKVIEEALEMLGENRDRKSIVLYRPHWKQGVIGI
AAGRLCEDYQVPVLLMCQKDDGQTVTGSARSIPGINIFQQLKECERYLTKYGGHAGAAGF
SLQRDNLTGFSKNISSLLAKELAEKETDRVIDIDGELSLDKVGKKDYYALRRLAPFGEQN
PKPKFIAYDTELIHSRTTSGDRHLRLILAQNGVQHSAIWWWAGKKKLAKKVDLIYSLDIN
DFQGERILQLLVDDILTENRQVEEVVEKSNGLEFELLDYRNWQGKKLELPVFADAAYYYE
GINKIKDKEIINRYQLTDKKTLVLLSCPPSLEIFRELIYTNRPAKLVLAFSKIDITGSTF
LQQLTGLIKYIINKKGGQLDVYQIAVLTSQLESTIVAGLQYLEAKGYISLNSFNPRYYIV
RNGEGKVKHENKMYLKNIKDLISETRSFIKYILSMDLSIIKNLIG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcaattaattatcaaaaagatatctatataccggaatggttagagcgagag
ctggatggtaatcagctactggccaggatattattacagagaggcattaatagccaagaa
aaagtcaaacgttttctggatcctgaacattatcaggcaactgttccagctgagtttccc
gggatggaagaggccgtggataggatattaactgcagttaaagctaagaaaaagatttgt
atttatggtgattatgatgtagatggtgtaacctcaacggtgattctgctggatctgctc
aataaaataaaggggcaggctgtataccatctacctgatagatttaaagagggttatggg
atgaataaagcagtgctcaggagactggccggagaagtagacttaattattacctgtgac
tgtggtatctccaatcaggaagagattgctctggctaaagaactgggtctggaggtaatc
gtaacagaccatcaccagttaccagataaacttccgccagctgaccttattctctcacct
aaactactggctggggatcatcaggcccttaatattcccggggccggtatggtttatttg
ttagttgttgcaattttgaagagactgggaagggaagaggaaagcaaggattttctggat
ttattatctctggccattgttgctgatgtggtccccttactggaagaaaaccgttacctt
ttacagctaggtttaccagaactggttaatacgaaaagacctggtctaattgaattattt
aaagtggccggtatagctgatccccaaaatatgactgaagaagatattgccttcagaata
gcacctaggcttaattccgctggtcgaatattaaaagcagatatggcagtagaattattg
ttagtagatgaagcatttttagcccggaaaaaagctatagaactggaagcagttaatcag
cgccggaaaaaattacaggataaagtaattgaggaagccctggagatgctgggagaaaac
agagacaggaagtcgattgttttatatcgtcctcactggaagcaaggtgttattggtatt
gctgctggcaggttgtgtgaggattaccaggttccagttttattaatgtgtcagaaagat
gatggtcagaccgtgactggttctgcccgttctattcccggtattaatatttttcagcag
ttaaaagaatgcgaaagatatctgactaaatatggtggccatgctggagctgctggtttt
tctctgcaacgagacaatctgaccggttttagtaagaatataagtagtcttttagctaaa
gagttagctgaaaaagaaacagatcgagtgattgatattgatggggaattatctctggat
aaagttggcaagaaggattattatgctttaagaagactggccccctttggggaacagaat
ccaaaacctaaatttatcgcttatgatacagaacttattcatagtaggactactagcggt
gatcgccatctgcgtttgattctggcccagaatggagtgcaacattctgctatctggtgg
tgggctggcaagaagaaactggctaagaaagttgatctaatctattccctggacatcaat
gattttcagggagaaagaatactacaactgcttgttgatgatatcttgactgaaaacaga
caagttgaagaggtagtggaaaaaagtaatggtctggaatttgagctgcttgattaccga
aactggcagggcaagaaattggagctacctgtttttgctgatgctgcttattattatgag
ggaataaataagataaaagataaggagataattaaccgttatcagctgactgataaaaag
accctggttttattaagctgtccaccttcactggagatatttagggaattaatctatacc
aatagacctgcaaaactggtgctggctttttcaaaaattgatattactggtagtactttt
ttgcagcagctgactggcttaataaagtatataataaataaaaaaggtggacagctagat
gtctatcaaatagccgtactaaccagtcaactggagagtactattgtggcaggtctgcag
taccttgaggctaaaggatatattagtttaaatagttttaatcccagatattatattgtt
agaaatggggaaggcaaggtaaagcatgaaaataaaatgtaccttaaaaatatcaaagat
cttatttcagaaacaaggtcatttataaaatatatcctttcaatggatctatcaattata
aaaaatttgattggttaa
DBGET
integrated database retrieval system
