Halocella sp. SP3-1: D7D81_12365
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Entry
D7D81_12365 CDS
T05769
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hals
Halocella sp. SP3-1
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hals01002
]
D7D81_12365
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hals01011
]
D7D81_12365
Peptidases and inhibitors [BR:
hals01002
]
Cysteine peptidases
Family C82
D7D81_12365
Peptidoglycan biosynthesis and degradation proteins [BR:
hals01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
D7D81_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AZO95325
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All DBs
Position
2571720..2573351
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AA seq
543 aa
AA seq
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MKKIVFLMLIFFIIVNVFLLNYIVKAELLSDRIIQRMGIHGNNHIEAFKRIDKINSDLLK
GFYKLRNYQPAWCKETRIYQITYDLLTIIKNSYQNGLNPDDYAYTYLYYLIKGLEADINN
DKVELDRLLKLELLLTEIYFKFSNDLLYGVSKHKGYDLGYQEIDLPVLLNNALETDNLRE
TIKNLDPIQPLYARMQLALKRLLKIFNDGGWPLISDKIELKKGVCHQAVLDLRERLLLSG
DLKPENNHAGLLFDDKLAEAVALFQLRHGLPASEILDEKTLTALNTSVEERIRQLKINMD
RLRWLPQKREDIYIVINIPDFKLEVMKDYSSIFESRVIVGDKNNQSPLFRDEIEYIVINP
YWKITDNIAKYEILPKLKNDPAYLDRNKIKILESWHNDSKIVLPESIEWHNISPEKFTYK
LRQEPGIFNSLGQIKFIFPNSYQVYLHDTPYKYLFNYPDRAKSHGCIRVEKPFSLASCLL
GKDWDEEEVAEIIRLNKRKVINLKEKIPIYLVYLTSWVDENGIIQHRDDVYNLDQELYEK
LKI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattgtatttttaatgcttattttcttcatcatagtaaatgtttttctatta
aactatattgtcaaagcagaattattaagtgacaggataattcagagaatgggaatacat
ggtaataaccatattgaagccttcaaaaggattgataagattaactctgacttattaaag
ggcttttataaactaagaaattatcaacctgcctggtgtaaggaaacgagaatatatcaa
attacttatgatctgcttacaattattaaaaattcttatcaaaatggtttaaatccagat
gattatgcctatacctacctttattatttaattaaaggccttgaagctgatataaataat
gataaagtggagctggatagattgcttaagctcgaactactactaactgaaatatatttt
aaattcagtaatgacctcttatatggtgttagtaaacataagggatatgatctagggtat
caagaaatagacctccctgttttactaaataatgcgcttgaaacagataatctaagggaa
acaatcaaaaatcttgatccaatacaaccgctttatgccagaatgcagcttgctttaaag
cgcttattaaagatatttaatgatggcggctggccgcttattagtgacaaaattgagtta
aaaaaaggtgtttgtcatcaggcagttcttgacttaagagaaaggcttttattatcaggt
gatcttaaacctgagaacaatcatgcagggttattatttgatgataaattagcagaagca
gttgctttatttcagttaagacatggtttgcctgcaagcgaaattttggatgaaaaaacc
ctgactgctttaaatacaagtgttgaagagagaatcaggcagttaaaaataaatatggat
cgtttaagatggcttccccaaaagagggaagatatatatatagtaattaatatccctgat
tttaaattagaggttatgaaagactattccagtatatttgaatcaagagtaattgttggg
gataaaaataatcaaagtccactttttagggatgaaatagaatatatagtaataaatcca
tactggaaaataactgataatatcgccaaatacgaaatattacccaaattaaagaatgat
cctgcttatttagataggaataaaataaaaattttagaaagctggcataatgatagtaaa
atagtcttaccagagagtatagaatggcacaacatttcccctgaaaagtttacttataaa
ttacgtcaggagcctggaatattcaattccctgggacagattaaattcattttcccaaat
agttatcaggtttatctgcatgatacaccatataagtatttatttaattatcctgacagg
gccaaaagccatggctgtatccgggtagaaaaaccattttctttagcatcctgtttactg
ggtaaggactgggatgaggaagaagtagctgaaattatcagactcaataaaagaaaggtt
attaatctcaaagagaaaatcccgatatatttagtatatttgacatcatgggttgatgaa
aatggtataatacaacaccgtgatgatgtttataatctagaccaagaattatatgaaaaa
cttaaaatatga
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