Halocella sp. SP3-1: D7D81_12895
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Entry
D7D81_12895 CDS
T05769
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
hals
Halocella sp. SP3-1
Pathway
hals02024
Quorum sensing
hals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D81_12895
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D7D81_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hals03019
]
D7D81_12895
03036 Chromosome and associated proteins [BR:
hals03036
]
D7D81_12895
Messenger RNA biogenesis [BR:
hals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D7D81_12895
Chromosome and associated proteins [BR:
hals03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D7D81_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AZO95417
LinkDB
All DBs
Position
complement(2679094..2679324)
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AA seq
76 aa
AA seq
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MKQQLNLQDNILNAVRKKKIGVTIFLMNGYQLNGMVAGFDNFTIILKNDKKTQMVYKHAI
STIIPQEEIEDIFKVE
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacaactaaatctacaggataatattttaaatgctgtgaggaagaaaaagata
ggggttaccatttttctaatgaatggctatcaacttaatggtatggttgctggttttgat
aacttcactattatattaaaaaatgacaaaaaaacacaaatggtatataagcatgcaatt
tcaactattattcctcaagaagaaattgaagacatatttaaagtagaataa
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