Halocella sp. SP3-1: D7D81_13595
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Entry
D7D81_13595 CDS
T05769
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hals
Halocella sp. SP3-1
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hals03016
]
D7D81_13595 (truB)
Enzymes [BR:
hals01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7D81_13595 (truB)
Transfer RNA biogenesis [BR:
hals03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7D81_13595 (truB)
Prokaryotic type
D7D81_13595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Motif
Other DBs
NCBI-ProteinID:
AZO95537
LinkDB
All DBs
Position
complement(2823069..2823971)
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AA seq
300 aa
AA seq
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MSKLNGIINVLKPPGITSFQVVSRVKKFLNVKKAGHTGTLDPAAAGVLPVCLGKATKIIP
FIPEDEKVYTAEITLGTSTDTLDAEGKIIDINDRWKLLDETQLSEVLGCFLGKIKQVPPM
YSAVHHQGKRLYELARQGKKVDREARDVVIKDINLIEVRLPVIRMRVRCSRGTYIRSLAR
DIGESLNTGAHLSFLIRESSGPFVIKEANTLQDIKNKATSLILPLDYPLHYPALILCDSS
VKKACNGAWLSEKDFSGFDEDISADQRVLIYDQEGNFISVNKVISIGDKVFNCKPLRVFV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcttaatggaattattaatgtgctgaaacccccgggaataacctcatttcaa
gtagtctcccgggttaaaaaatttttgaatgttaaaaaggctggtcatacaggtactctt
gacccggcagcagctggtgtgctgccagtctgcctggggaaggctaccaaaattattcct
tttatccctgaagatgaaaaggtttatactgcagaaattaccctggggactagtactgat
acccttgatgctgagggaaagataattgacattaatgatcggtggaagttacttgatgaa
acacagttaagtgaagtcctgggctgttttttaggaaaaataaaacaggtacccccaatg
tattctgctgtacatcatcagggaaaaaggctctatgaactggcccgccagggaaaaaag
gttgacagggaagcaagggatgtagtaattaaagatattaatttaattgaggtcagactg
ccagtcataagaatgagggttagatgttcgcggggaacatatattcgttcactggcccgt
gatattggagaatcattaaatacaggtgcacatttatcatttttaatcagggagagctca
ggaccatttgtcatcaaagaagctaacactctccaggatattaaaaataaggcgacttcc
ttaatattaccccttgattatccgctgcattaccctgctctgattttatgtgatagttct
gtaaaaaaggcctgtaatggagcctggttatcagaaaaggatttttctggatttgatgaa
gatatttctgcagatcagagggtgcttatctatgatcaagagggtaattttatttctgtt
aataaggttatcagtataggggataaggtatttaactgtaaaccactccgggtttttgtg
tga
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