Halocella sp. SP3-1: D7D81_14200
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Entry
D7D81_14200 CDS
T05769
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D7D81_14200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hals03400
]
D7D81_14200
Enzymes [BR:
hals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
D7D81_14200
DNA repair and recombination proteins [BR:
hals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D7D81_14200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
MdcG
Motif
Other DBs
NCBI-ProteinID:
AZO95645
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Position
complement(2947048..2948265)
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AA seq
405 aa
AA seq
DB search
MDRKIYSVSRITDYIKDLFSGDNLLNDIWVVGEISNFHHHSSGHMYFSLKDSNTCLNSLM
FKGYNRYLKYKLEDGMKVNAHGYIDLYKPRGSYQFYIDKIEPDGKGALYLAFEQLKEKLE
KEGLFASESKKKIPMLPKKIGIVTSPTGAAIRDILSVVKRRFAGVSVLIVPSRVQGNMAK
DELISGIDYLNKRSDIDLIIISRGGGSIEDLWPFNEEIVARAIYHSKKPIISGVGHEIDF
TISDFVADLRAPTPSAAAELAISSREEIEKNITGLFSRLKNAVNYKMERYRENLTTLKNN
RVFSLPEELYAAQIQERDELVKRFEWAMEKSIGSYKERFTLLNSKLNSLSPLKTLERGYS
IVSSRGKLIRDVSGIKKGDYLDIRLSNGTIKSIVEETEKEGEFSV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaaatttatagtgtttccaggataacagattatattaaggatttattttcc
ggagacaacttgctcaatgatatatgggtagttggagagatttctaactttcaccaccac
agttccgggcacatgtattttagcttaaaggatagtaatacttgtttaaattctttaatg
ttcaaaggttataataggtatttaaaatataaactggaagatggtatgaaggtaaatgcc
catgggtatattgatttatacaaaccacgggggagttaccagttttatattgataagatt
gaaccagatggtaaaggggccctttatctggcttttgaacaattaaaagagaaactggaa
aaagaaggtctttttgctagtgaatctaagaaaaaaatacctatgcttcctaaaaaaata
ggtattgtaacttcacctacaggtgcagcaatcagggatattttatcagtggtaaaaaga
cgttttgctggtgtatctgttttgatagtaccatcaagggtgcagggtaatatggccaaa
gatgaattgattagtggtattgattatttaaataaacgtagtgatatagacttgattata
attagccgcggtggtgggtcgattgaagacctctggccctttaatgaggagatagtggcc
agagctatttatcactcgaaaaaaccgattatcagtggtgttggtcatgaaatagatttt
acgataagtgattttgtggcagatctgcgggcaccgacaccatctgctgctgcagaactg
gctatttcttccagagaagagatagagaagaatataactggtctatttagtaggttgaaa
aacgctgtgaattataagatggagagatatagagaaaatcttactaccctgaaaaataac
agggtcttttccctacctgaagagttatatgctgcccagatacaggaaagggatgaactg
gtaaagaggtttgaatgggctatggaaaagagtattgggagttataaggagagatttact
ttattaaatagtaaactgaatagtcttagcccacttaaaacgttggaacgtggttattct
atagtaagttccaggggtaaattaatcagggatgtttctggtattaaaaagggtgactat
ctggatataagacttagtaatggaactataaagagtattgtagaggaaacagagaaagaa
ggtgaatttagtgtctga
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