Halocella sp. SP3-1: D7D81_16325
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Entry
D7D81_16325 CDS
T05769
Name
(GenBank) PAS domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hals
Halocella sp. SP3-1
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hals03000
]
D7D81_16325
Transcription factors [BR:
hals03000
]
Prokaryotic type
Helix-turn-helix
Other families
D7D81_16325
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS_9
PAS
PAS_8
AAA_2
GAF
AAA_5
Mg_chelatase
AAA
PAS_4
MCM
HTH_30
HTH_7
AAA_16
AAA_7
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AZO96028
LinkDB
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Position
complement(3422124..3424082)
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AA seq
652 aa
AA seq
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MNNLNLSDKKEYIINSHKRCKDYNVNVDRVFSGKIIDENELFEKLEAKRELIVTAEPFMN
QLYNFVKGSNFFSILTDEEGCILSVIGDEDILSEAFSFKMIPGAYMDEVNIGTNAMGTAL
VEGQAVQISGKEHFIKVYHRWTCSATPIRNTKGEIIASLDLTGYSESVHSHTLGMVVAAA
NAIEKMLEIKKYTEELSMAKMYTETVIDSIKAGILTVDLAGNIITVNSYVADMFGYKSDK
MRKMKIWDLFEGWEEVKTTVSAKQNFMEEEVFVNARKNKLQFNLSTYPILDYEENVRNII
FVFKEVKKVRKLANKIMGRQAIYTFDKIIGKDEDFQRMVKFAKKVSDSRSNILIMGESGT
GKELFAQAIHNCSNRSQEPFVAINCGAIPRNLIESELFGYEEGAFTGAKSSGQPGKFEIA
DGGTIFLDEIGEMPLDMQTRLLRVIEEDTVSRIGSIKENVVNVRVIAATNKDLYKEVQNG
NFRKDLFYRLNVLPVRLPPLRERKEDIPLLFEFFMKTKSKKMNKRSVKTSEEFIKTLVEY
EWPGNVRELENLVEWMINMESVPDKIGGRKTVLSKKSGISFKTSVLKDASAEIGKDLSLA
AVEKEHIIKVLNLYDGNISKSAKALNIGRNTLYRKIENYKIDCSVMEQCSNI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctaaatttatcagataaaaaagaatatataataaattctcataaaaggtgc
aaggattataatgttaatgttgatcgagtatttagcggcaaaatcattgatgaaaatgaa
cttttcgaaaaacttgaagcaaaaagagaattaattgttacggcagagccttttatgaat
caattatataattttgtgaaaggatctaattttttttcaatattaactgatgaagagggt
tgtattttaagtgtaattggagatgaagatattctttctgaggctttttcttttaaaatg
atacctggggcatatatggatgaagttaatattgggacaaatgctatggggacagcttta
gtagaaggtcaagcagtccagatttctggtaaagagcactttataaaggtctatcatcgt
tggacctgttctgctacaccgataagaaatactaaaggtgagattattgcttcccttgat
ttaaccggttatagtgaaagtgttcattcacatactcttggtatggttgtggcagctgcc
aatgccatcgaaaaaatgttggaaataaaaaaatataccgaagaactatctatggcgaaa
atgtataccgaaactgttattgattctataaaagcagggattctaacagttgatctagct
ggaaatattataactgttaacagttatgtagcagatatgtttggatataaatcagataaa
atgaggaaaatgaagatctgggatttatttgaaggctgggaagaggttaaaactacagtt
tctgcaaaacagaattttatggaagaagaggtttttgtaaatgctagaaaaaataagctt
cagtttaatttaagtacctatcctatactggactacgaagagaatgtaaggaatattatt
tttgtttttaaagaagtaaaaaaggtgaggaaactggctaataaaattatgggacgtcag
gctatctatacctttgataaaataattggcaaagacgaagattttcaaaggatggttaaa
tttgctaaaaaggtctcagatagtagatcaaatattctaattatgggtgagagtggtaca
ggtaaagagctttttgctcaggctattcataactgtagtaatagaagtcaagaacctttt
gtggcaataaactgtggtgctataccaagaaatttgattgaatctgaattattcggatat
gaagaaggggcttttactggtgccaaaagcagtggacaacctggaaagtttgaaatagct
gatggaggaacaatttttcttgatgaaattggtgagatgccccttgatatgcaaactaga
ttactgcgggtgattgaagaagatacagtgagtagaataggaagcattaaggaaaatgtt
gtaaatgttagagttattgcagcgactaataaggatttatataaagaggttcaaaatggg
aatttccgtaaggatttgttctatagactcaatgttctgcctgtaagacttccaccttta
cgagaacgaaaagaggatattccacttttatttgaattttttatgaaaacgaaatcaaaa
aaaatgaacaagagaagtgtaaaaacttctgaggagtttattaaaactctggtagaatat
gagtggcctggcaatgtaagagaacttgaaaatttagtagagtggatgattaatatggaa
tctgttccagataagattggtggaaggaaaactgtattatcaaaaaaatcagggattagt
tttaaaacctctgttctaaaagatgcaagtgctgaaataggcaaagatttaagtttggca
gctgtggaaaaagagcatattatcaaagtgcttaatttgtatgatggaaatatcagtaaa
agtgctaaggctttaaatataggcaggaataccctttatagaaaaatagaaaattataaa
atagactgttctgttatggagcaatgttccaatatataa
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