Halocella sp. SP3-1: D7D81_18805
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Entry
D7D81_18805 CDS
T05769
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D81_18805 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hals03019
]
D7D81_18805 (groL)
03110 Chaperones and folding catalysts [BR:
hals03110
]
D7D81_18805 (groL)
03029 Mitochondrial biogenesis [BR:
hals03029
]
D7D81_18805 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hals04147
]
D7D81_18805 (groL)
Enzymes [BR:
hals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D7D81_18805 (groL)
Messenger RNA biogenesis [BR:
hals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D7D81_18805 (groL)
Chaperones and folding catalysts [BR:
hals03110
]
Heat shock proteins
HSP60 / Chaperonin
D7D81_18805 (groL)
Mitochondrial biogenesis [BR:
hals03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D7D81_18805 (groL)
Exosome [BR:
hals04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D7D81_18805 (groL)
Exosomal proteins of other body fluids (saliva and urine)
D7D81_18805 (groL)
Exosomal proteins of breast cancer cells
D7D81_18805 (groL)
Exosomal proteins of colorectal cancer cells
D7D81_18805 (groL)
Exosomal proteins of bladder cancer cells
D7D81_18805 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZO96477
LinkDB
All DBs
Position
complement(3920213..3921871)
Genome browser
AA seq
552 aa
AA seq
DB search
MAKELKFGEDARRALERGVDTLANAVKVTLGPKGRNVVLEKSFGAPTITNDGVSIAREIE
LKNHYENMGAQTVKEVATKTNDVAGDGTTTATVLAQSIFKEGLKNVAAGANPMIIKKGIE
KAVNKVVDEIAKLSKPVEGKEAVSQVAAISAGNDDEIGNLIAEAMEKVGQDGVISVEESK
SMGTSLEVVEGMQFDRGYLSPYMVTDTDTMEAALEDPYILITDKKISSIQEILPLLEKVA
QSGKALLIMAEDVEGEALATLVVNKIRGTFNCVAVKAPGFGDRRKAMLEDIAILTGGQVI
TEDLGLKLENADISMLGQAHKVNVTKEETTIVEGHGDKKDIQGRIKQIKKQIESTTSDFD
REKLQERLAKLAGGVAVIQVGAATETELKEKKHRIEDALSATRAAVEEGLVSGGGTTLLD
AISALDEVELEGDEETGVDIVRKALETPVRLIADNAGYEGSVIVERVKERDAGIGFDAYK
GEFVNMIEVGIVDPAKVTRSALQNAASAAAMLLTTECLVADKEEDDDNAAGGGMPGGMGG
MGGGMPGGMGMM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaattaaagtttggtgaagatgcacgtcgtgctttagaacgtggtgttgac
accctggcaaatgctgttaaagttactctaggacctaaaggtcgtaatgttgtactggaa
aaaagttttggcgctcctactattactaatgatggtgtgagtattgcccgtgaaatagag
cttaaaaaccactatgaaaacatgggggctcaaacagttaaggaggttgctaccaagact
aatgacgtagctggtgatggtactaccactgctactgtacttgctcagtcaatttttaaa
gaaggccttaagaatgttgctgctggtgctaaccctatgattatcaaaaagggtattgaa
aaggcagtcaataaagttgttgatgagatagctaaattgagtaaacctgtagagggtaaa
gaagcagtttcacaggttgctgccatttctgccggtaatgatgatgagattggtaatttg
attgccgaagctatggaaaaggttggacaggatggagttatttctgttgaagaatccaaa
agtatggggacctctttagaagtagttgaaggtatgcagtttgaccgtggttacctatct
ccctatatggtgacagatactgatactatggaagctgctctagaagatccatatatactt
ataacagataagaaaatatccagtattcaggaaatattaccactcttagagaaggttgct
caatcaggtaaggccttattaattatggctgaagatgttgagggtgaagccctggcaact
ctggttgttaataaaatccgcggtacctttaactgtgtagcagttaaagcccctggtttt
ggtgaccgccgcaaggcaatgctggaagatatcgctatcttaacaggtggtcaggtaatt
actgaagacctgggattaaagttagaaaatgctgatattagcatgctaggccaggcccat
aaggttaatgtaaccaaagaagagactactattgttgagggtcatggtgacaaaaaagat
attcaaggtaggattaagcagattaaaaaacagatagaaagtactacctctgattttgat
agagaaaaactgcaggaaagattagctaagttagccggtggtgtggcagtaattcaggtt
ggtgctgctactgaaactgagttaaaagaaaagaaacatcgtattgaagatgccctatct
gctaccagggctgctgtggaagaaggtttagtatctggtggtggaacaacactattagat
gctatttctgcacttgatgaagttgagcttgaaggtgacgaagagactggtgtagacatt
gtcaggaaggccctggaaaccccagtacgtcttatcgctgataatgcaggttatgaaggt
tctgtaattgttgaaagggtaaaagaaagagacgctggtattggttttgatgcctacaaa
ggtgaatttgtaaacatgatagaagtaggtattgttgacccagccaaggttacccgttca
gccctgcagaatgctgccagtgcagctgctatgttattaacgacagaatgcctggttgca
gataaagaagaagatgatgataatgctgctggtggtggaatgccaggcggcatgggagga
atgggaggcggcatgccaggcggcatgggtatgatgtaa
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