Ruania alkalisoli: IM660_02705
Help
Entry
IM660_02705 CDS
T06878
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
halt
Ruania alkalisoli
Pathway
halt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM660_02705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halt03400
]
IM660_02705
Enzymes [BR:
halt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM660_02705
DNA repair and recombination proteins [BR:
halt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM660_02705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOR72551
UniProt:
A0A7M1SYI0
LinkDB
All DBs
Position
complement(659212..662961)
Genome browser
AA seq
1249 aa
AA seq
DB search
MHTSRAETTDPADTAGPDHGPDHVPAHGAARGPAHDRDTSRAPIDAATFDVYGPLPEGTT
VLEASAGTGKTFTIAALAARYVAEGVAELRDLMLVTFGRQATSELRDRVRERLVGTERAL
RAADPAGSDDPLVAMLADVDPDELDRRRARLARALSQLDAATITTTHGFCHQMLTALGIA
ADVDPAATFVADVADLVREVTDDLYVREFSDEKHPQLTPDELYALGKAAVSDHGAELEPK
GAAGTAGSADSADSADSADSGALRYRLAVAVREETERRKRVGHLLDYDDLLVLLRDALRD
PVHGPAAAQRVRERYRVVMVDEFQDTDPVQWEILRTAFHGHRTLVLIGDPKQAIYAFRGA
DVVAYLDAKRDAAATATLGTNWRSDAPLLQALHTVIGGAALGDDRITVGPVTPAHSEERF
DGGPALRIRQVTREAMGVRPGKDAYVGEARSFVAADTAADIVARLGQARIRDEVGGAWRA
LQPGDVAVLTRTNAQAEQVRAELNARGVPAVVSGLSSVFATPAAREWLTLLDALEQPGSR
QRASALALTPFVGWDATRLATAEDRDRDRLAETVRTWARLLASRGVAALHEAVTRSGVAE
RLMATTTGERRLTDLRHVGEVLHTVAVTEGLGAAALTGWLRRRIREATRDFEEERSRRLE
TDAAAVQVVTVHASKGLEFGVVYVPFAWDRYESATPSVLGFHADDGRRILHVGGQGSRLY
REARERYQREDRGEDLRLLYVALTRARHQVVAHWAPTRGNSAKGPLTRVLLGARELGGAP
AVAADTSAMRDDAAREAFEALAARSPAIAAELAPADASRERWVPPARDAPELSVAHLDRL
PDVSWRRASYTALTAAAHHAGPAAAAGHGETARPAGVVSEPEGAGVLDEPASEASAEDGF
VVDVAPVAGDAPGLDLPSPMADQPAGAAFGTLVHEVLEYADTAAADLDAELLARCRAASS
ARVDGLDVESLADALGTVMRTPLGPLAGGRTLAQIDPADRLSELEFELPLAGGDVPGGRE
DGGKDGGQVRAAAASAPAAATAPAAPLRAATLLDIADVLEGHLKAGDPFAPYPQMLRALA
ADPQGPVELRGYLTGSIDAVLRVREAPSDGSGSSAGSPAQRESTQFLVCDYKTNRLGTPG
ADLTVHDYRPEAVVEAMLHAHYPLQLLLYLVGLHRYLRWRLRGYDPDVHLGGGLYLFVRG
MAGPQTPAGPDGSPFGVLAWQPPTGLVPALSEVLDGVGTQRTQGTRRTV
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccagccgggccgagacaaccgatccggccgacaccgctgggcctgatcacggg
cccgaccacgtgcccgcccacggtgccgcccgtggtcccgcccacgaccgtgacacctcg
cgggcaccgatcgacgcggccaccttcgacgtatacggcccgctgccggagggcaccacc
gtgctggaggccagcgccggcaccgggaagacgttcacgattgcggcgctggcggcccgc
tacgtggccgagggcgtggccgaactgcgcgacctgatgttggtgaccttcggacgtcag
gccacctccgagctgcgagaccgggtgcgcgaacggctggtcggtaccgaacgggcgctg
cgggccgcggacccggccggcagcgacgacccgctggtggcgatgttggcggatgtggat
cccgacgagctggaccgccgtcgtgcccggttggcgagggcactctcccaactggatgcg
gccacgatcaccaccacccacgggttctgccaccagatgctcacggcgctgggcatcgcc
gcagacgtggacccggcggcgacgttcgtcgcagacgtggcggacctcgtacgggaggtc
accgacgacctgtacgtacgcgagttctccgacgagaagcacccccagctgaccccggac
gagctctacgcgctggggaaggccgccgtcagcgatcatggcgcggagctggagccgaag
ggtgctgcgggcactgccggcagtgccgacagtgccgacagtgccgacagtgccgactct
ggtgcactgcggtaccggctcgccgtagcggtgcgcgaggagaccgaacggcgcaagcgc
gtgggccacctgctggactacgacgacttgctggtgctgctgcgggatgcgctccgggat
ccggtccatggcccggcggcagcgcagcgggtgcgtgagcgctaccgggtggtgatggtg
gacgagttccaggacaccgacccggtgcagtgggagatcctgcgcaccgccttccacggc
catcgcacgctggtgctgatcggagacccgaagcaggcgatctacgccttccggggggca
gacgtagtggcctacctggacgccaaacgcgacgcggcggcgaccgcgacgctgggtacg
aactggcgcagcgacgccccgctgctgcaggcgttgcacacggtgatcggcggtgcggcg
ctcggggacgaccggatcaccgtgggaccggtgacccccgcccacagcgaggaacgcttc
gacggcggaccggcactgcggatccggcaggtcaccagggaggcgatgggggtgcgcccc
ggcaaggacgcctacgtgggcgaggcgcgatcgttcgtcgcggccgacacggccgcggac
atcgtggcccggctcgggcaggcgcggatccgggacgaggtgggtggcgcctggcgggcg
ttgcagccgggggacgtggccgtgctgacccgcacgaacgcgcaggcggagcaggtacgg
gccgagctcaacgcccgcggtgtgccggccgtggtctcggggctgtccagcgtgttcgcc
acgccggccgcccgggagtggctcaccctgctcgatgcgctcgagcaaccgggctcacgg
cagcgtgcgtcggcactggcgctcaccccattcgtcggctgggacgccacacggctggcg
acggcggaggaccgtgaccgtgaccggctcgccgagacggtgcgcacctgggcgcgcctg
ctcgcctcccgcggggtggcggcactgcacgaggccgtcacccgcagtggggtggccgag
cggctcatggcgaccacaaccggggagcgtcgcctgaccgacctgcggcacgtgggcgaa
gtgctgcacacggtcgcggtgaccgaggggctgggtgcggcggcgttgacggggtggctg
cgccgtcggatccgggaggccacgcgcgacttcgaggaggaacgcagccggcggctggaa
acggatgcggcggccgtgcaggtggtgaccgtgcacgcgagcaaaggcctcgagttcggt
gtggtgtacgtgccgttcgcgtgggaccgctacgagtcggccaccccgtcggtgctgggc
tttcatgccgacgacggccgccggatcctgcacgtaggcgggcagggctcacggttgtac
cgggaggcgcgcgagcggtaccagcgtgaggacaggggtgaggatctgcgactgctgtac
gtcgccctgacccgcgcccggcaccaggtggtggcgcactgggcgcccacccgtggcaac
tcggcgaagggaccgctcacacgagtgctactcggggcgcgggagctcggtggtgccccc
gcggtggcggccgacacctcagcgatgcgggacgacgcggcccgggaggcgttcgaggcg
cttgctgcccggtccccggcgatcgcggcggagctggcaccggcggatgcgagccgggag
cggtgggtgccgccggcccgggacgccccggagctctctgtggcgcacctggaccggctg
ccggatgtcagctggcggcgagcgtcgtacacggccctgacggcggcggcgcaccacgca
ggtccagcggccgctgcgggccacggtgagacagcccggccggcgggggtggtgagcgaa
ccggagggtgcgggagtgctggacgaacctgcgagcgaggcgagcgcagaggacggattc
gtggttgacgtcgcacccgtggccggcgatgctcccgggctcgacctgccctcgccgatg
gcggaccagcccgcgggggccgccttcggcaccttggtgcacgaggtgctcgagtacgcc
gataccgcggccgcggacctggacgccgagctcctggcgcggtgccgggcggcctcgtcc
gctcgggtggacggactggatgtggagtcgctcgccgatgcactcgggacggtgatgcgg
accccgctgggccccttggccggcgggcggacgttggcgcagatcgatccggcggaccgg
ctctccgagctggagttcgaactgcccctggctggtggtgatgtgccaggtgggcgcgag
gatggtggtaaggatggcggtcaggtcagggcggcggctgcgtccgctccggcggctgcg
acggctccggcggcacccctgcgtgcggcgacactgctggacatcgcagacgtgctcgag
ggccacctcaaggcgggcgaccccttcgcgccctacccgcagatgctccgggccctggcc
gcggacccgcagggaccggtggagctgcgcgggtatctgaccggatcgatcgatgcggtg
ctgcgggtgcgtgaggcaccctccgacggcagcgggtcgtcggcgggtagcccggcacag
cgagagagcacgcagttcctggtgtgcgactacaagacgaaccggctgggcacgccaggc
gcggacctgacagtgcacgactaccgacccgaggcggtcgtggaggcgatgctgcacgcg
cactatccgctgcagctgctgctgtatctggtgggcctgcaccgatacctgcggtggcgg
ttgcgcggctacgaccccgacgtgcatctgggcgggggcttgtacctcttcgtccggggc
atggcaggtccgcagaccccggccgggccggacggttcgccgttcggggtgctggcgtgg
cagcccccgaccggactggtgccggcattgtcggaggtgctcgatggggtgggcactcaa
cgcactcagggaacaaggcggactgtatga
DBGET
integrated database retrieval system
