Ruania alkalisoli: IM660_05355
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Entry
IM660_05355 CDS
T06878
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halt
Ruania alkalisoli
Pathway
halt03420
Nucleotide excision repair
halt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM660_05355 (pcrA)
03430 Mismatch repair
IM660_05355 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halt03400
]
IM660_05355 (pcrA)
Enzymes [BR:
halt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM660_05355 (pcrA)
DNA repair and recombination proteins [BR:
halt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM660_05355 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
IM660_05355 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
DEAD
GRP
CarD_TRCF_RID
ResIII
DUF6689
Motif
Other DBs
NCBI-ProteinID:
QOR71705
UniProt:
A0A7M1SVZ2
LinkDB
All DBs
Position
1267018..1269513
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AA seq
831 aa
AA seq
DB search
MTSLFDDLPLFPSATVPVGGDSHLPGVPSRTADEASPAEATPGESEGPPSLAAEALLDGL
NPQQKAAVEHTGGQLLIIAGAGSGKTRVLTHRIAYLLATGRARPGQILAITFTNKAAAEM
RERVAELVGPRAAVMWVSTFHSACVRILRREAKTLGIRSSFSIYDAADSQRLMTLVCREL
DLDPKRYPPKAFSRRVSDLKNELIDPDSYAGEVSESNPYEQNLLAAYRLYNERLRQAHAL
DFDDIIMTTVSLLQAFPAVAEHYRRRFRHILVDEYQDTNHAQYMLVRELTGVTTEIADGA
GSVAEEGALAALPPAELTVVGDSDQSIYAFRGATIRNILEFEADYPNARTIVLEQNYRST
QTILTAANAVIAKNSGRRAKNLWTDSGDGTQIVGYVADNEHEEARFIAEEIDRLIDAGTL
APKDVAVFYRTNAQSRALEEVFIRTGLPYKVVGGTRFYERKEIKDAIAYLRSIANPDDSV
NLRRILNVPKRGLGDRAEAMLAAHAERERVSFGAAIEDLDNVLGLATRSMTAARGFADMM
RELRALADGGATPAEVLDAALDNSGYLGELRASNDPQDHSRVENLAELHAVAAEFTENEP
EGDLGDFLERVSLVADADQIPDDDAGMVTLMTVHTAKGLEFPAVFVTGMEDGTFPHQRAL
ADPDELAEERRLAYVALTRARERLYLTRAGVRTSFGMPNEQPASRFLSDVPPELLDWKRE
ESSMATLRAGRGGYGGFGGQGGSGGGRRGSRGPSGPAVTTTRGERPASFGSATPRGDVPT
LDIGDRVTHDAYGMGRVVALEGTGSNAVAKIDFGGSGTKRLLLRYSPVEKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactgttcgacgacctgcccctgttcccctccgccacggttcccgttggcggt
gactcccacctgcccggtgtgccctcccggactgccgacgaggctagccccgcggaggcg
acacccggggagagcgaggggccgccgtcgttggccgccgaagcactcctcgacgggctg
aacccgcagcagaaggccgcggtggagcacaccggcgggcagctgctcatcatcgccggc
gccggatcgggcaagacccgcgtgctcacgcaccgcatcgcctacctgctcgccaccggg
cgggcgcgcccggggcagatcctcgcgatcacgttcaccaacaaggcggccgcggagatg
cgtgagcgcgtcgccgaactggtgggcccgcgtgcggcggtgatgtgggtctccaccttc
cactccgcgtgcgtgcggatcctgcggcgggaggcgaagacgctggggatccgatcgtcc
ttctccatctatgacgccgccgattcccagcggttgatgacgctcgtgtgccgcgagctg
gacctcgaccccaagcgttacccgccgaaggcgttcagccggcgcgtctcggacctgaag
aacgagctgatcgatcctgacagctacgccggcgaggtgagcgagtccaacccctacgag
cagaacctgctcgccgcctaccggctctacaacgagcgtctccggcaggcgcacgcgctc
gacttcgacgacatcatcatgaccacggtcagcctgctgcaggccttcccggccgtggcc
gagcactaccgccgccggttccggcacatcctggtggacgagtaccaggacaccaaccac
gcccagtacatgctggtgcgtgagctcaccggtgtcacaaccgagatcgccgacggcgca
ggttctgttgccgaggagggcgccctcgcggccctcccgcccgccgagctgaccgtggtg
ggtgactccgaccagtccatctacgccttccgcggtgccacgatccgcaacatcctcgag
ttcgaggccgactacccgaacgcgcgcaccatcgtgctcgagcagaactaccgctccacc
cagacgatcctcacggccgcgaacgcggtgatcgcgaagaactccgggcggcgcgcgaag
aacctgtggaccgactccggcgacggcacccagatcgtggggtacgtcgccgacaacgag
cacgaagaggcgcgcttcatcgccgaggagatcgaccggctcatcgacgccgggaccctc
gccccgaaagatgtggcggtcttctatcgcaccaacgcccagtcgcgtgcgctggaagag
gtgttcatccgcaccggactgccgtacaaggtagtgggcggcacccgcttctacgagcgc
aaggaaatcaaggacgcgatcgcctatctgcggtcgatcgccaacccggacgactcggtg
aacctgcgccgcatcctgaacgtccccaagcgcgggctgggggatcgggccgaggcgatg
ctcgccgcgcacgccgaacgtgaacgagtctcgttcggggcggcgatcgaggatctcgac
aacgtcctcgggctggccacgcgatcgatgacggccgcgcgcgggttcgcggacatgatg
cgcgagctgcgggcgctcgcggacggcggggccacaccggcggaggtgctggacgccgca
ctggacaactcgggctatctgggcgaactacgcgccagcaacgacccgcaggaccactcc
cgggtggaaaacctggctgagctgcatgcggtggcggccgagttcaccgagaacgagccc
gagggcgacctcggggacttcctggagcgggtctccctcgtggccgatgccgaccagatt
cccgacgacgatgccggcatggtcaccctgatgacggtgcacacagcgaagggtctggag
ttcccggcggtgttcgtcaccgggatggaggacggcacgttcccgcaccagcgggcgctc
gccgatccggacgagctcgccgaggagcgacggctggcgtatgtggcactgacgcgcgcc
cgggaacggctgtacctgacccgcgccggggtgcggacctcgttcgggatgccgaacgag
cagcccgcgagccggttcctctccgatgtccctccggagctgctggactggaagcgcgag
gagtcctcgatggcgaccctgcgtgccgggcgtgggggatacggcgggttcggcggccag
ggtggatccggaggtgggcggcgaggttcgcgcggtccgtccggtcctgcggtgaccacc
acccggggggagcgacccgcgtctttcggctcggccacgccgcgcggggacgtgcctacg
ctcgacatcggcgaccgggtcacccacgacgcctacggcatggggcgggtggtggccctg
gaaggaacgggcagcaacgccgtcgccaagatcgacttcggtggcagcgggaccaagcgg
ctgttgctgcggtactcgccggtggagaagttgtaa
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