Ruania alkalisoli: IM660_07995
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Entry
IM660_07995 CDS
T06878
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
halt
Ruania alkalisoli
Pathway
halt03030
DNA replication
halt03430
Mismatch repair
halt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM660_07995 (dnaE)
03430 Mismatch repair
IM660_07995 (dnaE)
03440 Homologous recombination
IM660_07995 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halt03032
]
IM660_07995 (dnaE)
03400 DNA repair and recombination proteins [BR:
halt03400
]
IM660_07995 (dnaE)
Enzymes [BR:
halt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM660_07995 (dnaE)
DNA replication proteins [BR:
halt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM660_07995 (dnaE)
DNA repair and recombination proteins [BR:
halt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM660_07995 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QOR72163
UniProt:
A0A7M1SZU8
LinkDB
All DBs
Position
1829916..1833473
Genome browser
AA seq
1185 aa
AA seq
DB search
MAADFVHLHVHTEYSMLDGAARLDDLFSEAQRLGQSAVAITDHGYLFGAYDFWSKARKYG
IKPIIGVEAYVTPGTSRFDKTRVRWGEADQAGDDVSARGAYTHMTILAKDTPGMHNLFRM
SSLASLEGQLGKWPRMDRELLETYSKGLIATTGCPSGEVQVRLRLGQYEEAVRAAGELQD
IFGKENYYVELMDHGLDIERRVTQDLLRLAKEINAPLLATNDLHYTKHEDAHAHEALLCV
QSGSTLEEPTYDQGGKRFAFGGSGYYLKSAEEMRELFAEFPEACDNTLRVAEQCEVAFTE
EVGRYMPHYPVPEGEDEVSTFVKAVEVGLQERYGGVVPEASRKQAEYEIEVITGKGYAGY
YLVVADFINWAKENGIRVGPGRGSGAGSIAAYAMSITELDPLEHGLIFERFLNPERESMP
DFDIDFDERRRGEVIKYVSDKYGEDKVTYIVTYGTIKAKQALKDASRVLGYPFAMGEKLT
KAMPAAVMGKDVSLAGMFDPEDKRYAEADEFRSVVNSDPEAQRVLETARGLENLKRQWGV
HAAGVVIASEPLLDIIPIMRREQDGAVITQVDFPAGEDLGLVKMDFLGLRNLTILDDALD
NIVVNGKEPVRVEELTLDDRATYELLGRGETLGLFQLDGGGMRSLLRMMKPDNFEDISAV
GALYRPGPMGANSHTNYALRKNGQQPITPIHPELAEPLESILGTTYGLIVYQEQVMEIAQ
KLAGYSLGQADLLRRAMGKKKKSVLDAEYTNFEAGMKANGYSAKAVKTLWEILLPFSDYA
FNKAHSAAYGVVSYWTAFLKAHYPAEYMAALLTSTRDDKDKSALYLGECRRMRITVLPPD
VNDSAAQFTPVGADIRFGLAAVRNVGQNVVAAIAKAREEKGAFTSFTDFLDKVPAVVCNK
RTIESLIKAGAFDSLGHTRRSLLMIHEQAVDAVIGVKRKEAEGQFDLFAGLGGDDDGDGA
GSSGFAVEVPDLPEWDKKQKLAFEREMLGLYVSDHPLSGIEHVLTQAADVSLATLTTDET
RADGSTVTIAGLITSLQRKMSKQGNPWAAVTIEDMEGSVEVMFFGETYLAYSTALAQDQV
VVVKGRIRRRDETLSLQAMEVTLPDVTAGESAPVTVRIPEARCSEPVLLQLRDVLSTHPG
VTEVHVRLTSPGRATVMRLEDALRVERTPALFGDLKALLGPNCLV
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatttcgtccacctgcacgtgcacaccgagtattcgatgctggacggagcg
gcccgcctggacgatctgttctccgaagcccagcgcctggggcagagcgcggtggcgatc
accgaccacggctacctgttcggggcctacgacttctggtccaaggcacgcaagtacgga
atcaagccgatcatcggcgtcgaggcctacgtgaccccggggacgagccggttcgacaag
acccgcgtgcgatggggtgaggccgatcaggccggcgacgacgtgtccgcccggggtgcg
tacacgcacatgacgatcctcgccaaggacaccccggggatgcacaacctgttccggatg
agctctctggcttcgctggaggggcagctgggcaagtggccgcggatggaccgcgagctg
ctggagacctacagcaaggggctgattgccaccacaggatgtccctcgggtgaggtgcag
gtccgcctgcgcctgggccagtacgaggaagcggtccgggcggcgggcgagctgcaggac
atcttcggcaaggagaactactacgtcgagctgatggatcacgggctcgacatcgagcgc
cgggtcactcaggatttgctgcggctggccaaagagatcaacgccccactgctggccacg
aacgacctgcactacaccaagcacgaggacgcccacgcccacgaggccctgctgtgcgtg
cagtcagggtcgacgctggaggagccgacctacgatcagggcgggaagcggttcgctttc
ggcggcagcggctactacctgaagtccgccgaggagatgcgcgagctgttcgccgagttc
cccgaggcctgcgacaacaccctgcgggtggccgagcagtgtgaggtggccttcacggag
gaggtgggccggtacatgccccactacccggtgccggagggggaggatgaggtctccacc
ttcgtcaaggcagtcgaggtggggctgcaggagcggtacggcggcgtcgtgccggaggcc
tcgcgcaagcaggccgagtacgagatcgaggtgatcaccggtaagggatacgccgggtac
tacctcgtggtcgccgacttcatcaactgggccaaggagaacggtatccgggtgggtccg
ggccgtgggtccggggccgggtcgatcgccgcctacgcgatgagcatcaccgagctggac
ccgctcgagcacggcctgatcttcgagcgcttcctcaaccccgaacgcgagtcgatgccg
gacttcgatatcgacttcgacgagcgccggcgcggtgaggtgatcaagtacgtcagcgac
aagtacggcgaggacaaggtcacctacatcgtcacctacggcacgatcaaggccaagcag
gccctcaaggatgcctcccgtgtgctggggtacccgttcgcgatgggagagaagctcacc
aaggcgatgccggctgcggtgatgggcaaggacgtctccctggcaggcatgttcgatccg
gaggacaagcgatatgccgaggcggatgagttccgatcggtggtcaactccgaccctgag
gcacagcgggtgctggagacggcgcgcggcctggagaacctcaagcgccagtggggcgtc
cacgcggcgggtgtggtgatcgcgagcgaaccgctcctggacatcatcccgatcatgcgc
cgcgaacaggacggcgccgtgatcacccaggtggacttccccgccggcgaggatctcggc
ctggtgaagatggacttcctcgggctgcgcaacctcaccatcctcgatgacgccctcgac
aacatcgtggtcaacggcaaggaaccggtgcgggtggaggagctcaccctggacgaccgg
gccacctatgagctgctcggacggggggagacgctcggtctcttccagctcgacggcgga
ggcatgcgctcgctgctgcggatgatgaagccggacaacttcgaggacatctccgccgtc
ggtgccctgtaccggccaggtccgatgggtgcgaactcccacaccaactacgcgttgcgc
aagaacggccagcagccgatcaccccgattcaccctgagcttgccgaacctctggagtcg
atccttggcaccacctacggcctgatcgtctatcaggagcaggtgatggagatcgcgcag
aagctggctggctactcgctcggccaagccgacctgctccggcgcgcgatgggcaagaag
aagaagtcggtgctcgatgccgagtacaccaacttcgaggccgggatgaaggcgaacggc
tactccgccaaggcggtgaagacgttgtgggagatcctgctgccgttctccgactatgcc
ttcaacaaggcccactcggctgcctatggtgtcgtctcctactggaccgccttcctcaag
gcgcactacccggccgagtacatggccgccctgctgacatccacgcgcgatgacaaggac
aagtccgctctctacctgggtgagtgccggcggatgcggatcacggtgctgccgccggac
gtgaacgattcggccgcgcagttcaccccggtcggggcggacatccgcttcgggctcgct
gccgtgcgcaacgtgggtcagaacgtggtggcagcgatcgccaaggcgcgggaggagaag
ggagcgttcacctccttcaccgatttcctcgacaaagttccagcggtggtgtgcaacaag
cgcaccatcgagtccctcatcaaggcaggagcgttcgactcgctcgggcacacccgccgt
tcactgctgatgatccacgagcaggcggtcgacgccgtcatcggggtcaagcgcaaggag
gccgaggggcagttcgatctgttcgccgggctcggtggtgacgacgacggcgacggggcg
ggttcctcaggtttcgccgtggaggtaccggacctgccggagtgggacaagaagcagaag
cttgccttcgagcgggagatgctcggcctgtacgtctccgatcaccccctctcgggtatc
gaacacgtgctcactcaggcggccgacgtctccctcgccaccctcaccaccgatgagacc
agggcggacgggtcgacggtcacgatcgccggtctcatcacctccctccagcggaagatg
tccaaacagggcaacccctgggccgccgtcacgatcgaggacatggagggctcggtcgag
gtgatgttcttcggtgagacctacctggcctactccacggcgctcgctcaggatcaggtg
gtggtggtcaagggccggatccggcgcagggacgagacgctctcgctccaggcgatggag
gtgaccctgccggacgtgactgcgggggagtcggccccggtgacggtgcggatccccgag
gctcgatgcagcgaacccgtgctcctgcagttgcgggacgtgctctccacccaccccggg
gtcaccgaggtgcacgtgcggctcacatcgcctggccgggcgacggtgatgcggctcgag
gacgcgctccgcgtggaacgcaccccagcgctgttcggagatctgaaggcgcttctgggg
ccgaactgcctggtgtga
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