Ruania alkalisoli: IM660_09970
Help
Entry
IM660_09970 CDS
T06878
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
halt
Ruania alkalisoli
Pathway
halt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM660_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halt03019
]
IM660_09970
03009 Ribosome biogenesis [BR:
halt03009
]
IM660_09970
Enzymes [BR:
halt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IM660_09970
Messenger RNA biogenesis [BR:
halt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IM660_09970
Ribosome biogenesis [BR:
halt03009
]
Prokaryotic type
rRNA helicases
IM660_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QOR72700
UniProt:
A0A7M1SYP7
LinkDB
All DBs
Position
2241061..2242866
Genome browser
AA seq
601 aa
AA seq
DB search
MPDWLLVSSSAASSAPAAVRSFAELGLPDSSLRAIEALGFTTPTDIQVAAIPPLLEGRDL
VGVAQTGTGKTAAFALPMLARVDTSARHVQALVLTPTRELALQVAEATASFTGDAGVQVL
SIYGGAPYGPQLRGLAQGAQVVVGTPGRVIDMLDKGALNLSAVQMLVLDEADEMLRMGFA
EDVDRILSAAAPDRQTALFSATMPAAIRSVARRHMSSPTEVATSRPSSTTDTITQTYAVV
PFRHKVGALARVLATTDAEAAVVFVRTRQTAEEVGSALLERGVSAATISGDVAQRERERI
VERLRSGSVRVLVATDVAARGLDVEKLGLVVNFDVPREAEAYVHRIGRTGRAGRSGTALT
FFTPRERGRLTQIERLTRTSLTEVPIPTPAQVSAHRAATVLDSVSERISAGRLHMYRDQL
AERIGSEGDPMEIAAALLALAVGDAGPRANDQDEVASPAEQTFDRESNSDRGRSASGRPR
RSASGSVYRVAVGHSHGVRPQDIVGAITGEGGLRGSDLGKIDIFSRFSLVEIGPDLSPDV
TRRIAQARVAGQSLHIRPDTGPRGNAGARPAASTKRGGRPEGRRPGAQHRGRRPVGSTGS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ctgcccgattggcttcttgtgtcctcttctgctgcttcttccgcgcccgctgccgtccgt
tcgtttgccgagctcgggcttcccgactcctccctgcgagcgatcgaagctctgggcttc
accactcccaccgacatccaggtcgccgcgatcccgccgctgctggaaggacgcgatctc
gtcggggtcgctcagaccggtaccggcaagaccgccgccttcgcactgccgatgctcgcc
cgggtggatacctcggcccgccatgtccaggcactggtgctgacaccgacgcgtgaactg
gcactccaggtggccgaggccacagcctcgttcaccggtgacgccggtgtgcaggtcctc
tcgatctacggcggtgcgccctacggtccccagctgcggggactcgcgcagggtgcacag
gtcgtcgtcgggacgccaggccgcgtgatcgacatgctcgacaagggcgcactgaacctc
tcagccgtgcagatgctggtgctcgacgaagcggacgagatgctccggatggggttcgcc
gaggatgtcgaccggatcctgtcggccgccgcccccgatcggcagacggcgctgttctcg
gcgacgatgccggcggcgatccggtcggtggcgcgtcgtcacatgagctctcccacggag
gtcgcgacgtcacgtccgtcctcgaccacggacacgatcacccagacgtacgccgtcgtc
ccgttccggcacaaggtcggtgcgctggcccgcgtgctcgcgacgaccgacgccgaggcg
gctgtcgtcttcgtgcgcacccgccagaccgccgaggaggtcggcagcgcgctcctggag
cggggcgtcagcgccgccaccatcagtggtgacgtcgctcagcgtgaacgcgagcggatc
gtggagcgactgcgatcgggcagtgtccgcgtgctcgtggccacggatgttgccgcccgc
gggctggacgtggagaagctgggactcgtcgtcaacttcgacgtccctcgcgaggccgag
gcgtacgtgcaccgcatcggacgcaccggtcgcgccgggcggtccggaacggcgctgacg
ttcttcaccccgcgtgaacgcggccgcctgacccagatcgaacggctcacccgcacgagc
ctcaccgaggtccccatcccgacccccgcgcaggtcagcgcccatcgtgccgcgacggtc
ctcgactcggtctccgagcgcatcagtgcgggtcggttgcacatgtatcgcgaccagctc
gctgagcgcatcggctccgagggtgatccgatggagatcgccgccgctctgctcgcactc
gccgtgggtgatgcgggtccgcgcgcgaacgaccaggacgaggttgcctctccagccgag
cagaccttcgatcgcgagagcaactccgatcgtggccgttcagccagtggtcgtccgcga
cgttccgccagcggatcggtctaccgggtcgcggtgggccacagccacggggtgcggccg
caggacatcgtcggcgccatcaccggtgaaggcggcctgcggggctccgatctgggcaag
atcgacatcttctcccgcttctcgctggtggagatcgggccggacctgagccccgatgtc
acccgcaggatcgcccaggcccgggtcgcggggcagtccctgcacattcgcccggacacc
ggaccgcggggcaatgcgggcgcgcgcccggcagcctcgacgaagcgcggcggccggccc
gagggccgacgccccggcgctcagcaccggggccgtcgccccgtggggagcaccggaagc
cgctga
DBGET
integrated database retrieval system
