Ruania alkalisoli: IM660_10160
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Entry
IM660_10160 CDS
T06878
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
halt
Ruania alkalisoli
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halt03016
]
IM660_10160
Enzymes [BR:
halt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IM660_10160
Transfer RNA biogenesis [BR:
halt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IM660_10160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QOR69101
UniProt:
A0A7M1SNU9
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All DBs
Position
2282088..2283347
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AA seq
419 aa
AA seq
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MTTSPPSGTSADPEHEPPPELVPLTEPADGVPDVVETPADLDRVVDALRRGTGPVAVDAE
RASGYRYGQSAYLVQLRREGAGTALLDPRTLPDLEAVGQALAGTEWVLHAASQDLPCLAE
VNLVPSRIFDTELAGRLLGRERVGLGPMVAAELGLELAKEHSAADWSTRPLPEAWLRYAA
LDVEVLVDLRDRLAAALERTGKLEWALQEFEAVRTAPAPPPRQQPWRRTSGSHQVRDGLG
LAIVRELWQVRDAEARRIDLSPGRLLPDAAIVAAATTRPATVAELAALRPFKHKAAARRT
RLWFEAVARAMALPTSAYPARRGPVSDTLPPPRAWKDRNPEAAARLDAVKLVVRARAAEL
DLPQENLLTPEYQRRIAWDPPSDLSLVGVTSELEQLGARPWQIEQVGVLLAGALRSARD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcccccccatccggaacctcggccgatcccgagcacgagccccctcccgag
ctcgtccccttgaccgagcccgcagacggtgttcccgacgtcgtggagacgccggcggac
ctcgaccgcgtggtcgatgcgctgaggaggggcacgggccctgtcgcggtcgacgccgaa
cgtgcctcgggctatcggtacggacagagcgcctatctcgtccagctgcgacgtgaaggt
gccggcaccgccctgcttgatcctcgaacgctgccggatctggaagccgtggggcaggcg
ctcgccggcaccgaatgggtgctgcacgctgcgagccaggatctgccgtgcctggccgag
gtgaacctcgtcccgagccgcatcttcgacaccgagctcgccgggcggttgctcgggcgc
gaacgggtgggtctggggccgatggtcgccgccgagctcggactcgagctcgcgaaggag
cactcggccgccgactggtccacccgcccgttgcccgaggcgtggctgcgctacgccgcg
ttggacgtggaggtcctggtggacctgcgggaccggttggccgcagccctggaacgcacc
ggcaagctggagtgggcgctgcaggagttcgaagccgtgcggacggcacctgcgccacca
ccacgacagcaaccgtggcgccggacctccggctcacatcaggtgcgagacgggctgggc
ctagcgatcgtgcgggaactgtggcaggtccgtgacgccgaagcgcgccgcatcgacctc
tcccccggccgactcctcccagatgcagcgatcgtcgccgccgccaccacgcggccggcg
acggtcgccgagctggcggcgttacgcccgttcaaacacaaggcggccgcacggcgcacc
cgcctgtggttcgaggccgtcgcccgcgccatggcattgcccacatcggcctatccagcc
cggcgcggtcccgtctcggacacgttgccaccgccacgggcgtggaaggaccgcaacccc
gaggcggcggcgcggctggacgcggtgaagctggtggtccgggcacgggcagccgagctc
gatctcccgcaggagaacctgctcacccccgagtaccagcgccgcatcgcgtgggatccg
ccctccgacctgagcctcgtcggtgtcacctctgaactcgagcagctgggtgcccggcca
tggcagatcgagcaggtgggcgtactcctcgccggcgcgctgcgttccgcacgcgactga
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