Ruania alkalisoli: IM660_10450
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Entry
IM660_10450 CDS
T06878
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
halt
Ruania alkalisoli
Pathway
halt03030
DNA replication
halt03430
Mismatch repair
halt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM660_10450
03430 Mismatch repair
IM660_10450
03440 Homologous recombination
IM660_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halt03032
]
IM660_10450
03400 DNA repair and recombination proteins [BR:
halt03400
]
IM660_10450
Enzymes [BR:
halt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM660_10450
DNA replication proteins [BR:
halt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM660_10450
DNA repair and recombination proteins [BR:
halt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM660_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QOR72711
UniProt:
A0A7M1SYY3
LinkDB
All DBs
Position
2342575..2344419
Genome browser
AA seq
614 aa
AA seq
DB search
MAAGARPVQLGLDEIGTPLVEATFVVVDLETTGGSPRESAITEIGAVKVRGGETVGEFQT
LVNPGTGIPPTITVLTGITNAMVTSAPRIAEVLPAFLEFSRGAILVAHNARFDVGFLRAA
CEQMDLPWPRPQIVDTVALARRVVTRDESPNHKLASLARLFGSVTAPDHRALTDARATVD
VLHGLLSRMAGLGVTHVEDLTTAADPVPATRRRKASLADGLPTGPGVYQFLGPSGDVLYV
GTAVNLRRRVRSYFTAAEKRRRIAEMIDLATAVRPVPCATELEAAVRELRAIATYRPPYN
RRSRSPEKQPWVRLTDEPHPRLSIVRHVPAEAASRAIGPFSSRSQAELAVAAIVAATGLR
TCSQRLPATPRPSASACVLAEMGSCVAPCVRETSEYAARAKRAEAALSGDASGVVAAARA
TIVRLSRHQRYEEAARRRDELVAYLRAASRTERHDGIRAARQLIAARRHSGGGWELLLLR
YGRFAGTAVSGRGAPVMGVVRTLAASGEDVSPPAGRPGAATAEETELVLRWLERPGTRLV
ELDCGETGTATGMGWALPLRGASALLPRLQELIVSQTEQGVLEPGSDGVASGPAGGSPSA
VVARPATRGASGAA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggcgcccgtccggtgcagctgggcctcgacgagatcgggacgccgttggtg
gaggcgaccttcgtcgtcgtcgacctggagaccacgggcggctcaccgagggagagcgcc
atcaccgagatcggtgcggtcaaggtgcgcggcggtgaaacggtcggcgagttccagacc
ctggtcaaccccggaacgggtatccctcccacgatcacggtgctgaccggaatcacgaat
gcgatggtgacgtcggcgccgcggattgccgaggtgcttccagccttcctggagttctcc
cgcggcgcgatcctggtggcccacaatgcgaggttcgacgtcggcttcctccgtgctgcg
tgcgaacagatggacctgccctggccccgaccgcagattgtcgacaccgtggccttggcg
cgcagggtggtcaccagggacgagtcccccaaccacaagctggcgagtctggcgcgtcta
ttcggatctgtgacggccccggaccaccgtgccctgacggacgcacgcgccacggtcgat
gtcctgcacgggctcctgagccggatggcggggctcggcgtcacacatgtggaggacctg
accaccgctgccgatcccgtacctgcgacacgccgtcgcaaagccagtctcgcagacggt
ctcccgaccggaccgggcgtctatcagtttctcggcccttctggcgatgtgctctacgtc
ggtaccgccgtcaacctgcgccggcgtgtccgtagctacttcacagcggctgagaagcga
cgacggatcgccgagatgatcgatctggccaccgcggtcagaccggtgccgtgcgcgaca
gagctcgaggccgccgtgcgggagctgcgggcgatagcgacctaccggccgccgtacaac
aggcgttcccgttcccccgagaagcagccctgggtgcgtctgaccgatgaaccacaccct
cggctgtccatcgtccggcatgtcccggccgaggcggccagccgcgcgatcggcccgttc
agctcccgtagccaggccgagctggcagtcgccgcgatcgtggccgctaccggactgcgt
acctgtagccagcggctacccgccacgccacgtccgtccgcatcagcgtgcgtgctcgcc
gagatgggctcgtgcgtggcgccgtgcgtgcgcgagacgtccgagtacgccgcacgagcg
aaacgggcagaggctgccctgagcggcgatgcgtccggcgttgtcgcggccgccagagca
accatcgtgcgactgtcccggcatcaacggtacgaggaggccgcgcggcggcgagacgag
ctggttgcctacctccgggccgcatcccgcaccgaacggcacgacgggatacgcgcagcg
cgccagctgatcgcggcccggcgccattccggcggcggctgggaactgctgctcctgcgg
tatggacgatttgccggtacagccgtcagcggccgcggtgctcccgtcatgggtgtggtg
cggacgctcgccgcgagcggtgaggatgtcagcccacccgcaggccgtccgggtgctgcc
accgccgaggagaccgaactggtcctgcgctggctggaacgccccggaacacgactggtc
gagctcgactgcggtgagaccggcacagccacaggaatgggctgggcgcttccgttgcgc
ggcgcctcggcgctcctgccgcggcttcaggagctcatcgtcagtcagactgagcagggt
gtactggaaccgggaagcgacggcgtcgcctccggtcccgccggcggttccccgtccgct
gtggtggcccggcctgccaccaggggtgcctcaggcgcggcatga
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