Ruania alkalisoli: IM660_15300
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Entry
IM660_15300 CDS
T06878
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
halt
Ruania alkalisoli
Pathway
halt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM660_15300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halt03021
]
IM660_15300
03400 DNA repair and recombination proteins [BR:
halt03400
]
IM660_15300
Enzymes [BR:
halt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM660_15300
Transcription machinery [BR:
halt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM660_15300
DNA repair and recombination proteins [BR:
halt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM660_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QOR69992
UniProt:
A0A7M1ST91
LinkDB
All DBs
Position
complement(3440692..3444582)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNVFDELRIGLATADEVRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAHMITWVDQEGRHEDLPSLQNEIDLEKDEITKKRDLDIAQRAERLEAD
LAELEAEGAKADARRKVKDSAEREMAQLRKRADAELDRLEQVWDRFKNLKVSDLEGDEML
YRQLQDRYGNYFEGSMGAGAIQKRLESFDLQAEADSLRETIRSGKGQRKTRALKRLKVVN
AFLTTKNSPQGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVSNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
SVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAVHLHPLVCGAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLFHLTSDKEGEPVGTG
RAFTTVAEAMMAFDAGDLDLNAEITIRLEDVVPPPGWEAPEGWEQGQTALLSTTLGRVLF
NEALPVDYPFFNEVADKKSISAIVNDLAERYPKSVVAASLDALKDAGYYWATRSGLTIAI
SDVEAPEAKAEILARHEEKAAKVQGQFDRGLLTDDERRQELVEIWNQATDEVATAMRENF
SASNTVNRMVTSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIAS
HGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTLPIAEKNPAGNVQRA
DTVETSVYGRTLAGPVEGPDGTVLGQGGEDVGDVLIETLLNAGVEQLKVRSVLTCESRVG
TCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRV
AELFEARTPKGEAPISEVAGRVAIEDTERSRKIVVTPDDGSEDFTYQVTKRARLLAHDGD
RVSVGQQLVAGAVDPKKVLRILGPRAVQKHLVDEVQETYRSQGVDIHDKHIEVIVRQMLR
RVTVLDSGDSHLLPGELSERGRFEDENRRVVSEGGQPASGRPELMGITKASLATESWLSA
ASFQETTKVLTEAAMSGRSDSLLGLKENVILGKLIPAGTGLPRYRNIRVEPTEEAKAEIY
PSFGYDEIDYGPVSDGGEAIALEELDLGRGFEADFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgaatcggtctcgcgaccgcggacgaggtc
cgcgcatggtcgcacggcgaggtgaagaagccagagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcgggaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtg
gaggtgacccgttccaaggtccgtcgtgagcggatggggcacatcgagctggccgctccg
gtcacacacatctggtacttcaagggtgtgccgtcccggctcggttacctgctcgacctg
gcgccgaaggacctcgagaaggtgatctacttcgccgcacacatgatcacgtgggtggac
caggagggtcggcacgaggaccttccgagtctgcagaacgagatcgatctcgagaaggat
gagatcaccaagaagcgcgatctggacatcgcgcagcgggccgagcgcctcgaggccgat
ctggccgagctcgaggccgaaggggccaaggcggatgcccgtcgcaaggtgaaggactcc
gccgagcgggagatggcgcagctgcgcaagcgtgctgacgctgagctggaccgtctcgag
caggtgtgggatcgcttcaagaacctcaaggtctccgacctcgagggtgacgagatgctc
taccgccagctccaggaccgctatggcaactacttcgagggttcgatgggtgccggcgcg
attcagaagcgcctcgagtctttcgatcttcaggctgaggccgattcgctgcgtgagacc
atccgttccgggaagggccagcgcaagactcgtgccctcaagcggttgaaggtcgtcaac
gccttcctcaccacgaagaactccccgcagggcatggtgctcgactgcatcccggtgatc
ccgcccgacctgcgcccgatggttcagctggacggtggccggttcgcgaccagtgacctc
aacgatctctaccgacgggtcatcaaccgtaacaaccgcctcaagcggctgctcgatctg
ggtgcacccgagatcatcgtcagcaacgagaagcggatgctgcaggaggccgtcgactcc
ctgttcgacaacggccgccgtggccgtccggtgactggtccgggaaaccggccgctgaag
tcgatctccgacatgctcaagggtaagcagggccggttccggcagaacctgctcggtaag
cgcgtcgactactccggccgtagcgtcatcgtcgtcggaccgcagctcaagctgcaccag
tgcggtctgccgaagcagatggctctcgagctgttcaagccgttcgtgatgaagcgcctc
gtggatctcaaccacgcgcagaacatcaagtcggcgaagcggatggtcgagcgagctcgt
tccgtggtgtgggacgtcctcgaagaggtcatcaccgagcacccggtgctgctcaaccgc
gcgcctaccctgcaccgcctgggcatccaggccttcgaaccccagttggtcgaaggtaag
gccgtccacctgcacccgctcgtgtgtggcgcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcagaggcccaggccgaggcgcgcatcctgatgctc
tcctcgaacaacatcctcaagccctctgacgggcgtccggtgaccatgccctcccaggac
atgatcatcggtctgttccacctgacctccgacaaggagggggaaccggtcggaaccggt
agggcgttcaccacggtggccgaagcgatgatggccttcgacgcgggtgacctcgatctg
aacgcggagatcacgatccgcctggaggatgtcgtcccgccgcccggctgggaagccccg
gagggatgggagcagggtcagaccgcactcctgagcacgacgctgggccgggtgctgttc
aacgaggcgctgccggtcgactacccgttcttcaacgaggtggctgacaagaagtcgatc
tcggcgatcgtgaacgacctcgccgagcgctacccgaagtccgtcgttgctgcgagcctc
gacgccctgaaggacgccgggtactactgggccacgcggtccgggctgacgatcgcgatc
tctgacgtcgaggctccggaggccaaggctgagatcctcgcccggcacgaggagaaggct
gccaaggttcaggggcagttcgaccgtggtctgctcaccgatgacgaacgtcgtcaggag
ctcgtcgagatctggaaccaggccaccgacgaggttgccacagcgatgcgggagaacttc
tctgcctcgaacacggtgaaccgcatggtgacctccggtgcccgtggtaactggatgcag
gtgcgtcagattgcgggtatgcgtggtctggtggcgaaccccaagggtgagatcatcccg
cgtccgatcaagtccaactaccgtgagggcttgtcggtactggagtacttcatcgcctcc
cacggtgcccgtaagggtctggcggacacggctttgcgtaccgccgactccggctacctc
acgcgacgtctggtcgacgtctcccaggacgtcatcatccgtgaggaggactgcggcaca
gagcgtggtctcacgctcccgatcgccgagaagaacccggcggggaacgtgcagcgagcg
gacacggtggagacgagtgtctacggacgcaccttggccggaccggtcgagggaccggat
ggcacggtgctcggccaaggcggtgaggatgtcggcgacgtcctgatcgagaccctgctg
aacgcgggtgtcgagcagctcaaggtgcgctcggtgctcacctgcgaatcccgcgtgggt
acctgcgccaagtgctacggccgctccctggccacgggcaagctcgtggacatcggagag
gcagtcggcatcatcgcggcacagtccatcggtgagccgggaacccagctgacgatgcgg
accttccacaccggtggtgtggccagtgccgaggacatcacccagggtctgcctcgtgtg
gccgagctgttcgaggcccgcacccccaagggtgaggctccgatctccgaggtcgcgggc
cgcgtggccatcgaggacaccgagcgttcgcgcaagatcgtcgtcacccccgacgacggc
agcgaggactttacctaccaggtcaccaagcgcgcccgtctgttggcgcacgacggcgac
cgggtgagtgtgggccagcagctcgtcgctggtgcggtggacccgaagaaggtgctgcgt
attctcggccctcgggctgtgcagaagcacctggtggacgaggtgcaggagacctaccgc
agccagggtgtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgc
cgcgtgaccgtgctggactccggtgactcccacctgcttccgggtgagctctccgagcgt
ggccggttcgaggacgagaaccgtcgcgtggtctccgagggcggtcagccggcctcggga
cgtccggagctcatgggaatcaccaaagcctccttggccaccgagtcgtggctgtccgcg
gcgtcgttccaggagaccaccaaggtgctcacggaggccgcgatgagcggtcgttccgac
tccctgcttggcctgaaggagaacgtcatcctcggtaagctcatcccggccggtacgggc
cttccccgctaccgcaacatccgggtggagcccaccgaggaggcgaaggcggagatctac
ccgagcttcggctacgacgagatcgactacggccccgtctccgacggcggcgaggcgatc
gcgttggaggaactcgacctcgggcgtggcttcgaggcggacttccgctga
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integrated database retrieval system
