Halorarum salinum: HUG12_00615
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Entry
HUG12_00615 CDS
T06744
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_00615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_00615
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_00615
Prokaryotic type
Archaeal type
TFB
HUG12_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_24
Sigma70_r4
HTH_AsnC-type
HTH_11
DUF7837
Zn_ribbon_3
GRXCR1-2_C
Motif
Other DBs
NCBI-ProteinID:
QLG60336
UniProt:
A0A7D5Q7V2
LinkDB
All DBs
Position
complement(122696..123631)
Genome browser
AA seq
311 aa
AA seq
DB search
MSLRDVYDTGFDEQTDNHLFATCPECDGSVIADAGERRCTDCGLVITEQRIDHGPEWRSF
DNDDTAPKRTGAPLTEARHDRGLSTEIGFGMNDPDRDLSNRKKAQVGRMRREHNRARFGS
KAERNLAHACGELNRMTGALDLPKTVAERAAAIYREAMQADLIRGRSIETIAAGCLYAAC
RCDGVTRTLAEIADVARCGESKVKLGYRVLNEELGLEAAPRHPPELVPRLASVVGASSAV
EHRAQGFARITVDEGIANGRNPNGVAAACVYSAGQAAGCSITQQELADEAGVTTLTIRKR
VRELDGLADPA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgagagacgtctacgacaccggcttcgacgaacagaccgataatcacctcttc
gcgacctgtcctgagtgcgacggctcggtgatcgcagacgccggcgagcgtcgctgtacc
gactgcggactcgtcatcaccgagcagcggatcgaccacggaccggagtggcgctcgttc
gacaatgacgacaccgctcccaagcgaacgggtgcaccgttaacggaagcgagacacgac
cgcgggctctcgaccgagattggcttcggcatgaacgatccggacagggacctctcgaat
cgaaagaaggcgcaggtcggacgtatgcgtcgcgaacacaaccgcgcgcggttcggatcg
aaggccgagcgaaatcttgcccacgcttgcggtgaactcaatcggatgaccggcgcgctc
gacctaccgaagacggtggccgagcgggcggcagcgatctaccgcgaggcgatgcaggcg
gatctgattcgcggccgatcgatcgagacgattgcagcgggctgtctgtatgcggcctgc
cgctgtgacggcgtcacccgaacgctggccgagatcgctgacgtcgctcggtgtggcgaa
tcgaaggtgaaactgggctaccgcgtcctcaacgaggaactcgggctcgaagcggcgcca
cgccacccgcctgaactcgtgccgcgactcgcatctgtggttggcgcgtccagtgcagtc
gagcatcgcgcgcaggggttcgcacgtatcacggtggatgaaggcatcgcgaacggtcgg
aatccgaacggtgtcgctgcagcgtgcgtgtattctgccgggcaggcagcagggtgctcg
atcacacaacaggaactcgcggatgaagcaggcgttactacgctcacgattcggaaacgg
gttcgtgaactcgatgggttggctgatccggcctga
DBGET
integrated database retrieval system
