Halorarum salinum: HUG12_00900
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Entry
HUG12_00900 CDS
T06744
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halu
Halorarum salinum
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halu03000
]
HUG12_00900
Transcription factors [BR:
halu03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG12_00900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
GAF
GAF_3
PAS_4
PAS_9
PAS
PAS_8
PAS_3
Response_reg
HTH_20
HTH_22
GerE
Sigma70_r4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QLG60385
UniProt:
A0A7D5QI54
LinkDB
All DBs
Position
complement(187058..190420)
Genome browser
AA seq
1120 aa
AA seq
DB search
MTSETVGSREDAAVADSRVLLVAGSDGGLDPSTVERALAGATVVAERDETDALNRVGAGD
GFDCVVASQSPSGPDGIQLLQVVREKYPDLPFVLVVPPDADWAVEAALTSGATDVVTLGD
GGVADSLLPQRVRGAIVRADGGTTTDDDRRRDAEGTRTADDGGARWDALAAFGGFALGAP
DVTTACGRATRVVADALDTEYVAALELGEDAFELRGAVGWTEEPDGSVTASASVDGLGGR
ALASGEPAVEPDRATGEWSAVPTLRPDREVHGGLAVPVGPSDGPWGVLEVLTTDGGPPPS
EDVAFVRGVAAALSTALARQRFESASRRAVDRAPLGYAELDAEWRFTALNDRAAALLGRD
ERELVGESLFDAFPAGFESRLRREFRAVSGTDEPASLEAAYPPSGARFELHAYASNAGPV
VWFEDVTERTAWERRRRLSELVATTQEGGFFVLDGEMRFVAVDDEFVAVTGRSREELLGA
HLSNVIADGPRAAAGALRRELTTEGRGFLRTELTVERADGGRTPVAARFAATTPDRDGFA
GVVGTVRDVAERERHERTLTALADAVRELGAAETDVEVCERVGRAATDLLDRERATVYRF
DEDGNVLRPVTTSRPAAGDAATPPPVGPADGSPVWEAFVGGEPAVTDGRVVEPNRAVQGA
TRRSVVLPLNGYGVLLVDAAGEEAVDGRTRRLTSLLAAMAEAAFDRVALAGDLRERETAL
SSRADRLDRLDRAFDTLLGVGRARSRAGTREEFQQAVCEELVGDGRFDFAWIGTFDATHE
RLVPRAWAGTERGYVDAVSLVLGEDRTEPAIRAARTGDRVLVPNVAHGGMNEQWRRELLD
RGYRSVLSLPLRHGDTLYGVLTVCADDPGAFDEPSDRLFEGVATATANGLDAWESRRALL
SDSVVELDVRIPESNDLPSRIAAGVGGRVTFEGAVPHSDGTSMLYLSVSDVPLESVLTYL
EESVAVEHASSVVDSDDGLIVVTVAEPTIVSHVTGFGGAIRELTATGGETRLRVELPQPA
DVRGFVESLRAEHAGAELLARRSRERPLRSRQTFGAELEELLTDRQLEVLRTAYLNGYFE
WPRANTGEEIADRLGITQPTFNNHLRVAERKLLTLLLEER
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggaaacggtcggcagccgcgaggacgccgccgtcgccgacagccgcgtcctc
ctcgtcgccggctccgacggggggctcgacccctcgacggtcgaacgcgcgctcgcgggc
gcgaccgtcgtcgcggaacgcgacgagaccgacgccctgaatcgggtcggggcgggcgac
gggttcgactgcgtcgtggcgtcccagtcgccctcgggcccggacggcatccagctcctg
caggtcgtccgcgagaagtacccggatctcccgttcgtgctcgtcgtgccgccggacgcg
gactgggccgtcgaggcggcgctcacgtccggcgcgaccgacgtggtcacgctcggcgac
ggtggagtggccgactcgctgctcccgcagcgggttcgcggcgccatcgtccgcgccgac
ggcgggacgacgaccgacgacgaccgacgacgggacgccgaagggacgcgaaccgccgac
gacgggggggcgcggtgggacgcgctcgccgcattcggcgggttcgcgctcggggcgccg
gacgtcacgacggcctgcgggcgggcgacgcgggtcgtcgccgacgcgctcgacacggag
tacgtcgcggcgctggaactgggcgaggacgcgttcgaactcaggggtgcggtcggctgg
accgaggagcccgacgggtcggtcacggcgtccgcgagcgtcgacggcctcggcggccgc
gcgctcgcgtccggcgaaccggccgtcgaacccgaccgggcgaccggcgagtggtcggcc
gttccgacgctccgccccgaccgggaggtccacggcggcctggccgtccccgtcggaccg
tcggacgggccgtggggggtcctggaggtcctcacgaccgacgggggaccgcccccgtcg
gaggacgtcgcgttcgtccggggcgtcgctgccgccctctcgacggccctcgcccgccag
cggttcgagtcggcctcccgccgcgccgtcgaccgcgccccgctggggtacgccgaactc
gacgcggagtggcggttcacggccctgaacgaccgcgcggccgcgctgctcggtcgcgac
gaacgggaactggtcggggagtcgctgttcgacgcgttccccgccggcttcgagtcgcgg
ctccgccgggagttccgggcggtttcggggaccgacgaaccggcgagcctcgaggcggcg
tacccgccctcgggtgcgcggttcgaactccacgcatacgcctcgaacgccggtccggta
gtgtggttcgaggacgtcaccgagcggacggcgtgggagcggcgacggcgcctgtccgaa
ctcgtcgcgaccacccaggagggcgggttcttcgtcctggacggggagatgcggttcgtg
gcggtcgacgacgagttcgtcgccgtgacgggtcgctcccgcgaggaactcctcggcgcg
cacctctcgaacgtcatcgcggacgggccacgtgccgccgcgggcgcgctccgtcgggaa
ctgacgaccgagggtcgggggttcctccggacggaactgaccgtcgaacgggccgacggc
ggccggacgccggtggccgcccggttcgcggcgacgaccccggaccgggacgggttcgcg
ggggtcgtcggcacggtccgggacgtcgccgagcgcgagcgccacgagcggacgctgacg
gcgctggccgacgcggtccgcgaactgggggccgcggagacggacgtcgaggtctgtgag
cgcgtcggccgggcggcgaccgacctgctcgaccgggagcgggccacggtgtatcggttc
gacgaggacgggaacgtcctccgtcccgtcacgacgtcccggcccgcggccggcgacgcg
gcgacgccgccgccggtcgggccggccgacgggtcgccggtctgggaggcgttcgtcggg
ggggagccggcggtcaccgacgggcgggtcgtcgagccgaaccgggcggtccagggagcg
acccggcggtcggtggtcctccccctgaacggctacggggtgctcctcgtcgacgcggcc
ggggaggaggcggtcgacgggcggacgcgacgactgacgtcgctgctcgcggcgatggcg
gaggcggcgttcgaccgggtcgcgctcgcgggcgacctccgcgagcgcgagacggcgctc
tcgtcgcgggcggaccggctcgaccggctcgaccgggcgttcgacacgcttctgggcgtc
ggtcgcgcacgctcacgggcgggaacgcgggaggagttccagcaggcggtctgtgaggag
ctcgtcggtgacgggcggttcgacttcgcctggatcgggaccttcgacgcgacccacgag
cggctcgtcccgcgagcgtgggccgggaccgagcgcggctacgtcgacgccgtctcgctc
gtgctcggggaggaccgcaccgaacccgcgatccgggcggcgcggaccggcgaccgggtg
ctcgtcccgaacgtcgctcacggggggatgaacgagcagtggcgccgggaactgctcgac
cgcggctaccggtcggtcctcagcctcccgctccgacacggggacacgctgtacggagtg
ttgaccgtctgtgcggacgatccgggagcgttcgacgagccgtccgaccgactgttcgag
ggcgtcgccaccgcgacggcgaacgggctcgacgcgtgggagagcaggcgggcgttgctc
tccgacagcgtcgtcgaactcgacgtccggatcccggagtcgaacgacctgccgagccgg
atcgccgccggcgtcggcggccgcgtgacgttcgagggggcggtcccccactcggacggc
acctcgatgctgtacctgtccgtgagcgacgtccccctcgagtcggtgctgacgtacctc
gaggagtccgtcgccgtcgagcacgcctcctcggtcgtggactcggacgacggcctcatc
gtcgtcacggtcgcggagccgacgatcgtctcccacgtcaccggcttcgggggggccatc
cgggagctgacggcgacggggggcgagacgcgcctgcgggtcgaactcccccagccggcg
gacgtgcgcgggttcgtcgagagcctccgggccgagcacgcgggcgcggagctgctcgcg
cggcgctcccgggagcgcccgctccgctccaggcagacgttcggcgccgaactcgaggaa
ctgctcaccgaccgccagctcgaggtgctccgcaccgcgtacctgaacggctacttcgag
tggccgcgcgcgaacacgggcgaggagatcgcggaccggctcggcatcacccagccgacg
ttcaacaaccacctccgggtcgccgagcggaagttgctcacgttgctcctcgaggagagg
tag
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integrated database retrieval system
