Halorarum salinum: HUG12_01890
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Entry
HUG12_01890 CDS
T06744
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_01890
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_01890
Prokaryotic type
Archaeal type
TFB
HUG12_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QLG60561
UniProt:
A0A7D5QAV4
LinkDB
All DBs
Position
complement(410786..411763)
Genome browser
AA seq
325 aa
AA seq
DB search
MTRPTRQREERERRQWEDRGESESDEGTELDPEDVDEEDLVRTADGELIHEPTGLIVEDD
QIDRGPEWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMH
RLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRS
IEGVSTSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYV
PRFSSELELSEEVQNKANEIIETTAEEGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVA
DVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcccacccgccagcgggaggaacgggagcgacgacagtgggaggaccgaggg
gagtccgagtcggacgaggggacggagctcgatccggaggacgtcgacgaggaggacctc
gttcgaacggctgacggggagctgattcacgagccgacggggctcatcgtggaggacgac
cagatcgaccgcgggccggagtggcgggcgttcaaccactccgagcggcagtccaagtcc
cgcgtcggcgcgcccgtcaccgagacgatgcacgacaagggcctcaccaccaccatcgac
tggaaggacaaggacgcctacggtcgctcgctctcctcggaaaagcgttcccagatgcac
cgcctccgcaagtggcaagagcgcatccgcaccaaagacgccggcgaacgcaacctccag
ttcgccctctcggaaatcgaccgcatggcctccgcgctcggcgtgccccgctcggtgcgc
gaagtcgcctcggtcatctatcgccgcgcgctcaaagaggacctcatccgcggccgctcc
atcgagggggtctccacgtccgcgctgtacgccgcctgtcggaaggagggcatcccccgc
tcgctcgaggaaatctccgaggtctcgcgggtcgaacgcaaggagatcggccggacgtac
cgctacatctcccaggaactcggcctcgagatgaagccggtcgaccccaagaagtacgtc
ccgcggttcagctccgaactcgagctcagcgaggaggtccagaacaaggccaacgagatc
atcgagacgaccgcggaggagggactgctgtcggggaagtcgccgacgggcttcgcggcg
gccgcgatctacgccgcctcgctcttgtgtaacgagaagaagacccagcgggaagtcgcc
gacgtcgcccaggtgaccgaggtcaccatccgcaaccgctaccaggagcagatcgaggcg
atgggcatccacagttag
DBGET
integrated database retrieval system
