Halorarum salinum: HUG12_02560
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Entry
HUG12_02560 CDS
T06744
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_02560
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_02560
Prokaryotic type
Archaeal type
TFB
HUG12_02560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
Prok-RING_1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QLG60683
UniProt:
A0A7D5QED3
LinkDB
All DBs
Position
complement(545524..546381)
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AA seq
285 aa
AA seq
DB search
MSTARTACPECDGRLRADGDETVCGDCGLVVAADRLDRGPEWRTFSDDDTDPRRTGAPLT
RSRHDRGLSTEIGRSRVKGRKRKQWARMRRQHTRARISTKRERNQVYGFTEIRRLTSNQS
LGDRIRDQACSLFQSAQKENLLRGRSIEGFAAAAVYAACRVAGISRTRGELLAEAKADED
ELRAAYDALNRDLGLPVGPIDPVEYLPRFASELDLGPEVERVAREYLERARDRGIVNGRN
PGGVAAACLYAAARDAGADCTQAGAAAVADVTPVTLRNSYADLQD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcacgaactgcctgcccggaatgtgacggacgactgcgcgccgacggcgac
gagacggtgtgtggcgactgcggcctcgtcgtcgccgccgaccgactggaccggggcccc
gagtggcggacgttctcggacgacgacaccgacccgcggcggaccggcgcgccgctcacc
cggtcgcggcacgaccgcggcctctccaccgagatcggacgtagccgcgtgaagggacga
aaacgcaagcagtgggctcggatgcggcgccagcacacgcgggcacgcatctcgaccaaa
cgcgagcggaaccaggtgtacggcttcaccgagatccggcggctgacgagcaaccagtca
ctcggcgaccgaatccgcgaccaggcgtgttcgctgttccagtcggcccagaaggagaac
ctcctccgcggccgctccatcgaggggttcgccgccgccgcagtgtacgccgcctgccgg
gtcgccggcatctcccggacgcgcggggagctactcgccgaggccaaggccgacgaggac
gagctccgcgcggcctacgacgcgctcaaccgcgacctcgggctccccgtcggccccatc
gacccggtcgagtacctcccgcggttcgcctccgagctcgatctgggtccggaggtggag
cgcgtcgcgagggagtacctcgaacgcgcccgcgatcgggggatcgtcaacggcaggaac
ccgggcggggtcgccgcagcgtgcctgtacgccgccgcccgcgacgccggagccgactgc
acgcaggcgggcgccgcggcggtggcggacgtcaccccggttacgctgcggaacagttac
gccgacctgcaggactga
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