KEGG   Halorarum salinum: HUG12_03250
Entry
HUG12_03250       CDS       T06744                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
halu  Halorarum salinum
Pathway
halu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:halu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HUG12_03250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:halu03000]
    HUG12_03250
   03021 Transcription machinery [BR:halu03021]
    HUG12_03250
Transcription factors [BR:halu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HUG12_03250
Transcription machinery [BR:halu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HUG12_03250
  RNA polymerase III system
    TFIIIB
     HUG12_03250
  RNA polymerase I system
    SL1/TIF-1B
     HUG12_03250
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: QLG60814
UniProt: A0A7D5L8V4
LinkDB
Position
686248..686808
AA seq 186 aa
MADAKESIHIENVVASTGIGQELDLQTVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGANSTAAVREALHLVFDELRALDIPIEEDPEITVQNIVTSADLGASLNLNAIA
IGLGLENIEYEPEQFPGLVYRLGEPDVVALLFGSGKLVITGGKEPSDAEAAVDVITERLS
ELGLLG
NT seq 561 nt   +upstreamnt  +downstreamnt
atggccgacgcaaaggagtcgattcacatcgagaacgtcgtcgcgtcgacgggaatcggg
caggagctcgacctccagaccgtcgcgatggacctcgagggcgctgattacgacccggag
cagttccccgggctggtgtatcgcacgcaggatccaaagagcgcggcgctcatcttccgg
tcgggcaagatcgtctgtaccggggcgaactcgaccgccgccgtccgggaggcgctccac
ctcgtgttcgacgagctgcgggcgctcgacatccccatcgaggaggacccggagatcacc
gtccagaacatcgtcacctccgcggacctgggcgcgtcgctgaacctcaacgccatcgcc
atcggcctcgggctggagaacatcgagtacgagcccgagcagttccccgggctcgtctac
cggctcggcgagccggacgtggtcgcgctgctgttcggctccggcaagctcgtcatcacg
ggcgggaaggagccgagcgacgcggaggcggccgtcgacgtcatcacggaacggctgtcg
gagctcggcctcctcggctga

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