Halorarum salinum: HUG12_03305
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Entry
HUG12_03305 CDS
T06744
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
halu
Halorarum salinum
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halu03016
]
HUG12_03305 (thpR)
Enzymes [BR:
halu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HUG12_03305 (thpR)
Transfer RNA biogenesis [BR:
halu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HUG12_03305 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
baeRF_family3
HVSL
CATASP
MMPL
Motif
Other DBs
NCBI-ProteinID:
QLG60824
UniProt:
A0A7D5QFM8
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All DBs
Position
complement(696807..697364)
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AA seq
185 aa
AA seq
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MPRLFVALDLPDALAGAFADLREDAPDAPGLSYTDPGDAHVTVKFLGDTPEDDVDEAVDA
LERAVDAADAGPFPVEVAGLGAFPDEEYIRVVWVGIDEGAEELVRLHEAVERETVALGFD
PEEHEFTPHVTLARMSDARGKEDVRRFLRETDPELGRFEASELRLKASELDRDGPTYRTV
ARFPL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgactgttcgtcgcgctcgacctcccggacgcgctcgcgggggcgttcgccgac
ctccgggaggacgctccggacgcgcccggcctctcgtacacggaccccggggacgcgcac
gtgacggtgaagttcctcggcgacacccccgaggacgacgtcgacgaagcggtcgacgcg
ctggagcgggccgtcgacgccgccgacgcggggccgttcccggtcgaggtcgccgggctc
ggcgcgttccccgacgaggagtacatcagggtcgtctgggtcggaatcgacgagggcgcc
gaggaactcgtccggctccacgaggccgtcgagcgcgagacggtcgcgctcgggttcgac
ccggaggagcacgagttcaccccacacgtgacgctggcgcggatgagcgacgcccgcggg
aaggaggacgtacggcggttcctccgggagaccgaccccgaactcggccggttcgaggcg
agcgaactccgtctgaaggcgagcgaactcgaccgcgacgggccgacgtaccggaccgtc
gcccggttcccgctgtga
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