Halorarum salinum: HUG12_03700
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Entry
HUG12_03700 CDS
T06744
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
halu
Halorarum salinum
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halu03016
]
HUG12_03700 (endA)
Enzymes [BR:
halu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HUG12_03700 (endA)
Transfer RNA biogenesis [BR:
halu03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HUG12_03700 (endA)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLG60893
UniProt:
A0A7D5L8T6
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All DBs
Position
773447..774478
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AA seq
343 aa
AA seq
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MEATLRDDVVVASGDARQRFHDSRGYGRARGAEVTLARIEAAHLLYRGDLDAVDGMGFRE
FFTLSVAEGERFAARFLVYADLRERGFYVAPDRDGWPGEGADPLPDLTVFARGEKPGGDV
AYRVRVAGEREELPARDLAGLSLAVVDEESEVTYFDCAAGGGFEGDTEYDLPGDLDADLL
EDRVVCWDPPESLYESAFYGQPIAGRDAAVVAGLQLSLLEAADLAERGVVDLDPDAVVER
GREVEGGRFDRRLTVYRRLRDRGVVPKTGYKFGADFRTYDAVESVESLPHSEALVRVVDP
DHRFHPRDLALDVRLAGGVRKRMVFALAGLDSVAYLTVARLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacgctccgcgacgacgtcgtggtcgcctcgggcgacgcccgccagcggttc
cacgactcgcgcggctacggccgggcccgcggcgccgaggtcacgctcgcccgcatcgag
gccgcccacctgctgtaccgcggcgacctcgacgccgtcgacgggatgggcttccgcgag
ttcttcaccctgtcggtggccgagggcgagcggttcgccgcccggttcctggtgtacgcc
gacctgcgcgagcgcggcttctacgtcgcgcccgaccgcgacggctggccgggggagggc
gccgacccgctcccggacctcaccgtcttcgcccggggggagaagccgggcggcgacgtc
gcctaccgggtccgcgtggcgggcgagcgcgaggaactccccgcccgcgatctggccggc
ctctcgctcgcggtcgtcgacgaggagagcgaggtgacgtacttcgactgcgcggccggc
gggggcttcgagggcgacaccgagtacgaccttccgggcgatctcgacgccgacctgctg
gaggaccgcgtcgtctgctgggacccgcccgagtcgctgtacgagtccgcgttctacggc
cagccgatcgccgggcgcgacgccgcggtggtggccggactgcagctctcgctgctcgaa
gcggcggacctcgccgagcgcggggtcgtggacctcgacccggacgccgtcgtggagcgc
ggacgcgaggtcgagggcgggcggttcgaccgccgcctgaccgtctaccggcgcctgcgc
gaccggggcgtcgtccccaagacgggctacaagttcggcgcggacttccgcacgtacgac
gcggtcgagtcggtcgagtcgctcccgcactccgaggcgctggtgcgggtggtcgacccc
gaccatcggttccacccgcgggacctcgcgctggacgtgcgcctcgccggcggcgtgcgg
aagcgaatggtttttgcgctggccggcctcgattcggtcgcgtacctgacggtcgcacga
ctcaccccatga
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