Halorarum salinum: HUG12_04765
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Entry
HUG12_04765 CDS
T06744
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_04765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_04765
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_04765
Prokaryotic type
Archaeal type
TFB
HUG12_04765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_3
AbiEi_2
Auto_anti-p27
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QLG61082
UniProt:
A0A7D5QF09
LinkDB
All DBs
Position
complement(999222..1000160)
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AA seq
312 aa
AA seq
DB search
MALRDVYETGFDEETDYHLAATCPECDGTVLADAGERHCTDCGLVITDQRLDRGPEWRSF
DDDDTAPRRTGAPLTETRHDRGLSTEIGYGLADSDRSLSSEKKAQVRRLRREHNRARFGS
KAERNLAHACGEITRMTSALDLPESVRERAAAIYREAMQENLIRGRAIETIAAGCVYAAC
RCDGITRTTDEVAAVAQSDESKVTLGYRVLNQELGLDAAPRHPPALVPRLVSAVDASSAV
GRRARRLADVAVEAGIANGRDPNGVAAACVYVAGKEMGKRITQAELGDAADVTPVTVRER
RNELQNAQSGCK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcgagacgtctacgaaacaggcttcgacgaagagaccgattaccacctcgcc
gcgacgtgtcccgagtgcgacggcaccgtactcgcggacgccggcgagcgccactgcacc
gactgcggactcgtcatcaccgaccagcggctcgaccgtgggccggagtggcgctcgttc
gacgatgacgacacggcgcccaggcgaacgggcgctccgttaactgagaccagacacgac
cgcgggctctcgaccgagatcggctacggcctggccgactcagacaggagcctctcgagt
gagaagaaagcgcaggttcggcggctccgtcgcgaacacaatcgcgccaggttcgggtca
aaggctgagcggaatctcgcgcacgcctgcggagagatcaccaggatgacaagcgcgctc
gatctgcccgagtcagtgagagagcgggcagccgcgatctaccgcgaggcgatgcaggag
aacctcatccgtggccgggcgatcgagaccatcgccgcgggctgtgtctatgcggcctgt
cgctgcgatggaatcacgcggacgaccgacgaggtcgcggcggtcgcccaaagtgatgaa
tccaaggtgacgctggggtaccgagtcctaaatcaggaactgggactcgatgcagcacca
cgacatccgcccgcgctcgtcccgcggctcgtgtctgcggtcgatgcctccagcgcggtc
gggcgtcgtgctcggcggctcgcagacgtcgcggtcgaggctgggatcgcgaacggccga
gatccgaacggcgtcgcggcggcctgtgtgtatgttgcggggaaggagatgggtaaacgg
attacgcaagcggaactcggcgacgcagccgacgtaacgccggtgacggttcgagaacgg
cggaacgaactgcagaacgcacagagcggctgcaaatga
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