Halorarum salinum: HUG12_05265
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Entry
HUG12_05265 CDS
T06744
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
halu
Halorarum salinum
Pathway
halu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HUG12_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_05265
03019 Messenger RNA biogenesis [BR:
halu03019
]
HUG12_05265
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HUG12_05265
RNA polymerase I system
HUG12_05265
Messenger RNA biogenesis [BR:
halu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HUG12_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_Ribbon_1
DZR
Zn_ribbon_RanBP
HypA
Cytochrom_c3_2
Zn_ribbon_3
Zn_ribbon_RPB9
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QLG61174
UniProt:
A0A7D5L9F4
LinkDB
All DBs
Position
complement(1114526..1114723)
Genome browser
AA seq
65 aa
AA seq
DB search
MAEDRLACRECHYVNDPDSQTCDNCGSSSLTEDWAGYIIITHPEQSEIAPEMNVTKAGSY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaccggctcgcgtgccgcgagtgccactacgtgaacgaccccgacagccag
acctgcgacaactgtggctcctcctcgctcacggaggactgggccggctacatcatcatc
acccatcccgagcagtccgagatcgcccccgagatgaacgtgaccaaggcgggcagctac
gcgctgaaggtccgctga
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integrated database retrieval system
