Halorarum salinum: HUG12_07285 Help Entry HUG12_07285       CDS       T06744                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism halu  Halorarum salinum Pathway halu04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:halu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     HUG12_07285  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:halu03019]     HUG12_07285    03009 Ribosome biogenesis [BR:halu03009]     HUG12_07285    04131 Membrane trafficking [BR:halu04131]     HUG12_07285   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:halu04147]     HUG12_07285 Messenger RNA biogenesis [BR:halu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      HUG12_07285 Ribosome biogenesis [BR:halu03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     HUG12_07285 Membrane trafficking [BR:halu04131]  SNARE   SNARE associated proteins    Others     HUG12_07285  Autophagy   Aggrephagy    Other aggrephagy associated proteins     HUG12_07285 Exosome [BR:halu04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    HUG12_07285 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N CDC48_2 AAA_16 RuvB_N AAA_5 TIP49 AAA_22 AAA_2 AAA_33 AAA_14 NPHP3_N nSTAND3 RNA_helicase IstB_IS21 AAA_28 Mg_chelatase AAA_7 AAA_18 ATPase ABC_tran AAA_17 Sigma54_activat AAA_3 AAA_24 AAA_25 DUF815 NB-ARC TsaE Parvo_NS1 AAA_30 AAA_11 Zeta_toxin AAA_lid_PRS2_C KAP_NTPase NACHT PhoH SLFN-g3_helicase Vps4_C IPT Motif Other DBs NCBI-ProteinID:  QLG61540 UniProt:  A0A7D5QB49 LinkDB All DBs Position 1524400..1526625 Genome browser AA seq 741 aa AA seqDB search MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN TDTVRIDGFTRQNADVGIGERVTIRKAEATKAESLTLAPPEEASVQFGSDAAGMVKRQIL KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVDTEPEGVVLITEDTEVELREEPISGFE KTGGGITYEDIGGLQGEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED VTGEVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDES GRKEVLQIHTRGMPLSDDVNLDRLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE DIPPSLIDRMIVKRSDFHGALADVEPSAMREVLVELPKITWDDVGGLEDPKQKVKEAVEW PLSDPEKFDRMGVEAPKGILLYGPPGTGKTLMAKAVASETNANFISVRGPQLLSKWVGES EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGDV MVIGASNRPDMIDPALIRSGRFDRLVMIGQPDEEGREQILKIHTGDTPLAPDVSLRELAE ITDGYVGSDLESIAREAAIEALREDDDAEEVGMRHFRQAMESVRPTITDDILSYYEGVEE QFKGGGTDSLRRDQGGRIGFQ NT seq 2226 nt NT seq  +upstreamnt  +downstreamnt atgaacgaagtccaactcgaagttgcgaaagcctacccgaacgactcggggcgcggcatc gcgcgtctcgaccccgacaccctgctccacctgaagctctcccccggtgacatcatcgag atcgagggcgcggagacgaccgccgcgaaagtgtggcgcgccgaccggcaggactggaac accgacaccgtccgcatcgacgggttcacccgccagaacgccgacgtcggcatcggcgag cgggtcaccatccgcaaggccgaggcgacgaaggccgagagcctgacgctcgctcccccc gaggaggcgtcggtccagttcggctcggacgcggcgggcatggtgaaacgacagatcctc aagcggccggtcgtcgagcgcgacatcgtccccgtgatgtcgagcacgaaccacccgttc atgcgctcgcccggccaggccatcccgctcatcgcggtcgacaccgagccggagggcgtc gtcctcatcaccgaggacaccgaggtcgaactccgcgaggagcccatctccgggttcgag aagacggggggcggcatcacctacgaggacatcggcggcctccagggcgagatccagcgc gtgcgggagatggtcgaactcccgatgaagcacccgcagatcttccagaaactcggcatc gagccgccccagggcgtcctgcttcacggcccgcccggcaccgggaagacgctgctcgcc aaggcggtcgccaacgagacgagcgcctcgttcttctccatcgcgggccccgagatcatc tcgaagtactacggcgagtccgaacagcagctccgggagatcttcgaggacgcgaaggac gactcaccgtcgatcatcttcatcgacgaactggactccatcgcgcccaaacgcgaggac gtcaccggcgaggtcgagcgccgcgtcgtcgcccagttgctgacgatgatggacgggctg gagacgcggggacaggtcatcgtcatcgcggcgacgaaccgcgtcgactcggtcgacccc gcgctccgccgacccggccgcttcgatcgcgagatcgagatcggcgtgccggacgagtcc ggccgcaaggaggtgctgcagatccacacccgggggatgccgctctcggacgacgtgaac ctcgaccgcctggccgacgagacgcacggcttcgtcggcgccgacatcgagagcctgacg aaggaggccgcgatgaaggcgctccgccggtacctccccgagatcgacctcgacgaggag gacatcccgccgagcctcatcgaccggatgatcgtcaagcggagcgacttccacggggcg ctcgccgacgtcgagccctcggcgatgcgggaggtgctcgtcgaactcccgaagatcacc tgggacgacgtgggcggcctggaggaccccaaacagaaggtgaaggaggccgtcgagtgg ccgctctccgaccccgagaagttcgaccggatgggcgtggaggcgccgaagggcatcctg ctgtacggcccgcccggcaccgggaagacgctgatggcgaaggccgtcgccagcgagacg aacgcgaacttcatctccgtcagggggccacagctcctctcgaagtgggtcggcgagtcc gagaaggcgatccggcagacgttccggaaggcccggcaggtctccccgaccatcatcttc ttcgacgagttggacagcctcgcgcccagccgcgggcaggagatgggcaacaacgtctcc gagcgcgtcgtcaaccagctgctcaccgagctcgacgggctggaggagatgggcgacgtg atggtcatcggcgcgagcaaccggccggacatgatcgacccggcgctgatccgctcgggt cggttcgaccgcctcgtgatgatcggccagccggacgaggagggtcgcgagcagatcctc aagatccacaccggcgacacgccgctggcgcccgacgtgagcctccgcgaactcgcggag atcaccgacggctacgtcggctccgacctggagtcgatcgcccgcgaggccgccatcgag gcgctccgggaggacgacgacgccgaggaggtcgggatgcgacacttccgccaggcgatg gagagcgttcgtccgacgatcaccgacgacatcctgagctactacgagggcgtcgaggag cagttcaagggcggcgggacggactcgctgcgcagggaccagggcggccggatcgggttc cagtag

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