Halorarum salinum: HUG12_08825
Help
Entry
HUG12_08825 CDS
T06744
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
halu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_08825
09124 Replication and repair
03420 Nucleotide excision repair
HUG12_08825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_08825
03036 Chromosome and associated proteins [BR:
halu03036
]
HUG12_08825
03400 DNA repair and recombination proteins [BR:
halu03400
]
HUG12_08825
Enzymes [BR:
halu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HUG12_08825
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HUG12_08825
Chromosome and associated proteins [BR:
halu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HUG12_08825
DNA repair and recombination proteins [BR:
halu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HUG12_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_16
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QLG61823
UniProt:
A0A7D5QFZ8
LinkDB
All DBs
Position
complement(1835114..1837474)
Genome browser
AA seq
786 aa
AA seq
DB search
MTEAEGWRAVFGHDEPYPEQEDGIEAAVETARDGGYLALEGACGTGKTMLALAAGIHLVR
DPDSDFERVFVLTSVKQQLRQFEQDLETINAGLPDDWRSVSAMTLVGKADVCPYARENRA
GIDDSNVYDRCEGLRERTRALTGEGGDATAGALVQQARRAQTGIADSGESGVSYLETAGE
PTPYLPSMPEHGGGATAEGTEFCPFYAQFLDDLPEEGDPAEAVPFDFADAGLIDAEELVR
LSAGHGSCPHSIMGALVPEVEVVVGNYYHAFDPVTAATFTGALLDDSTFVVCDEAHMLEP
RVRDLVSDGVGDATLRDAENELTRVIQPVAFEDEGKRARGTTDAELVRGELSDSEVSLGE
LELVRDFVRDLREEVDRRVTAHLEREHPGWRADLTDLTDAELPLRDPEEPAEDELSEWAR
EAGYGGKVWARAEHVGAVVERVLNEAEEEETKRATPAVGRLLNAWYRLDHESYFRELELD
RTWDETEPVDSWRRAYNARLSLHNCVPADAIGDRLAEFGGGVLMSATLAPLDVFREVTGL
NYLESEGRPVEERTYGLAFPDGNRESLAVDAPKFTYGNRGPPGEGNETREAHADAVVEVV
GTTPGNVLVGMPSYGEAEWMAGVLEERTDAPVLRDESSADAATEDLKAEFFGGGAKTLVT
SIRGTLTEGVDYRGDRLSAAVVCGVPIINTASPRTKAVKTAYDREFGNGFETALTVPAVR
KARQAVGRVIRGPEEVGVRALVDARYARDSWNSVREHFPEPAREEFQPVSPDMLRFGLER
FWDGQE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggccgagggctggcgagcagtgttcgggcacgacgagccgtaccccgaacag
gaggacgggatcgaggccgccgtcgagacggcgcgcgacggagggtatctcgcgctggag
ggcgcttgcggcaccgggaagacgatgctcgcgctcgccgccgggatccacctcgtccgt
gacccggactccgacttcgagcgcgtgttcgtgctcaccagcgtcaagcagcagctccgc
cagttcgaacaggacctggagacgatcaacgccggcctgcccgacgactggcggtccgtc
tccgcgatgacgctcgtcgggaaggcggacgtctgcccgtacgcccgcgagaaccgggcc
ggaatcgacgactcgaacgtgtacgaccgctgtgagggcctgcgcgaacggacgcgcgcc
ctgacgggcgaggggggcgacgcgacggcgggcgcgctcgtccagcaagccaggcgcgcc
cagaccggcatcgcggactcgggcgagtcgggcgtctcctatctcgagaccgcgggggag
ccgacgccgtacctcccctcgatgcccgaacacggcgggggggcgaccgccgaggggacc
gagttctgtcccttctacgcgcagttcctcgacgacctgcccgaggagggcgacccggcc
gaggcggtgccgttcgacttcgccgacgcggggctgatcgacgccgaggaactcgtgcgg
ctgtcggcgggccacggctcctgcccgcactcgatcatgggcgcgctcgtccccgaggtg
gaggtcgtcgtgggcaactactaccacgcgttcgaccccgtgacggcggcgacgttcacc
ggcgcgctgctcgacgactcgacgttcgtggtctgtgacgaggcgcacatgctggagccg
cgggtgcgggacctcgtctcggacggcgtcggcgacgcgacgctccgggacgccgagaac
gagctcacgcgggtcatccagcccgtcgcgttcgaggacgaggggaagcgggcgcggggg
acgaccgacgcggaactcgttcggggggagctctcggactcggaggtgagcctgggcgaa
ctcgaactcgtgcgcgacttcgtgcgcgacctccgcgaggaggtcgaccgacgggtgacc
gcccacctcgaacgggaacacccgggatggcgcgcggacctcacggatctcacggacgcg
gaactcccgctccgcgaccccgaggagcccgccgaggacgagctctccgagtgggcgcgc
gaggcgggctacggcgggaaggtgtgggcccgcgccgagcacgtcggcgcggtcgtcgag
cgggtcctgaacgaggccgaggaggaggagaccaagcgcgcgacgccggcggtcggccgg
ctgttgaacgcctggtaccggctcgaccacgagtcgtacttcagggagctggaactggac
cggacgtgggacgagacggagcccgtcgactcctggcggcgggcgtacaacgcgcggctg
tcgctccacaactgcgtgcccgcggacgccatcggcgaccgcctcgcggagttcggcggc
ggcgtgttgatgtccgcgacgctcgccccgctcgacgtgttccgcgaggtgacggggctg
aactacctcgaatccgaggggcggccggtcgaggagcggacctacgggctcgcgttcccc
gacggaaaccgcgaatcgctcgccgtggacgcgcccaagttcacgtacggcaaccgcggg
ccgccgggcgaggggaacgagacgcgcgaggcccacgccgacgccgtcgtggaggtggtc
gggacgacgcccggcaacgtgctcgtcgggatgcccagttacggcgaggccgagtggatg
gcgggcgtgctggaggagcggacggacgcgccggtcctacgcgacgagtcgagcgcggac
gcggcgaccgaggacctgaaagccgagttcttcggcggcggggcgaagacgctggtgacg
agcatccgcgggacgctcacggagggcgtcgactaccgcggggaccggctctcggcggcg
gtcgtctgcggggtgccgatcatcaacaccgcgtcgccgcggacgaaggcggtgaagacg
gcgtacgaccgcgagttcggaaacgggttcgagacggcgctgacggtgccggcggtccgg
aaggcgcgccaggccgtcggccgggtcatccgcggcccggaggaggtcggggtccgcgcg
ctcgtggacgcccgctacgcccgcgactcgtggaactcggtccgcgaacacttcccggaa
cccgcccgcgaggagttccagcccgtgagcccggacatgctccgcttcggtctggaacgg
ttctgggacgggcaggagtga
DBGET
integrated database retrieval system
