Halorarum salinum: HUG12_10505
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Entry
HUG12_10505 CDS
T06744
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_10505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_10505
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_10505
Prokaryotic type
Archaeal type
TFB
HUG12_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
Ribosomal_S27e
Zn_ribbon_PaaD
A2L_zn_ribbon
Zn_Ribbon_YjdM
Cyclin_C
Cyclin_N
Zn_ribbon_InsA
Sigma70_r4
Zn_ribbon_Elf1
DUF5816
Motif
Other DBs
NCBI-ProteinID:
QLG62138
UniProt:
A0A7D5QAY0
LinkDB
All DBs
Position
2144037..2144993
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AA seq
318 aa
AA seq
DB search
MEGPSRQRQREAGESETQSDETVTCPECESDEVVMDADQGELVCDDCGLVLDERQIDRGP
EWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQ
ERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVAT
AALYAACRQEGIPRSLDEVAEVSRVEQKEIGRTYRYISQELGLELKPVDPKQFVPRFASA
LGLSEETQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVT
EVTIRNRYQEQIEAMGFR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccgagtcgacagcgacagcgagaggcgggcgagtcggagacgcagtcggac
gagacggtcacctgtccggagtgcgagtcggacgaagtcgtcatggacgcggaccagggg
gagctcgtctgcgacgactgtggactggttctggacgagcgtcagatcgaccgcgggccg
gagtggcgggcgttcaaccactccgagcggcagtccaagtcccgcgtcggcgcgcccgtc
accgagacgatgcacgacaagggcctcaccaccaccatcgactggaaggacaaggacgcc
tacggccgctcgctctcctcggagaaacgctcccagatgcaccgcctccgcaagtggcaa
gagcgcatccgcaccaaggacgccggcgaacgcaacctccagttcgccctctcggaaatc
gaccgcatggcctccgcgctcggcgtgccccgctcggtgcgcgaagtcgcctcggtcatc
tatcgccgcgcgctcaaagaggacctcatccgcggccgctccatcgagggggtcgcgacc
gccgccctctacgccgcctgtcgccaggagggcatcccccgctcgctcgacgaggtggcg
gaggtctcgcgggtcgaacagaaggagatcggccggacgtaccgctacatctcccaggaa
ctcggcctcgaactgaagccggtcgaccccaagcagttcgtcccgcggttcgcctccgcg
ctcggcctcagcgaggagacgcaggccaaagcgacggagatcatcgacgtctccgccgag
cagggcctgctgtcggggaagtcgccgacgggcttcgcggcggccgcgatctacgccgcc
tcgctcttgtgtaacgagaagaagacccagcgggaagtcgccgacgtcgcccaggtgacc
gaggtcaccatccgcaaccgctaccaggagcagatcgaggcgatgggattccggtag
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