Halorarum salinum: HUG12_12680
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Entry
HUG12_12680 CDS
T06744
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
halu
Halorarum salinum
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halu03000
]
HUG12_12680
Transcription factors [BR:
halu03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG12_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
HTH_Crp_2
HTH_IclR
DUF7343
HVO_A0261_N
HTH_11
HTH_45
EutK_C
FaeA
MarR
HTH_3
TrmB
HTH_23
HTH_PafC
Mrr_N
NirdL-like_HTH
HTH_Cmi2_C
HTH_5
WHD_RNase_R
HTH_13
TetR_C_7
SoFic-like_C
WHD_MCM8
HTH_27
HTH_20
NMD3
Rrf2
HTH_69
P22_Cro
YdaS_toxin
Mnd1
CggR_N
LexA_DNA_bind
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QLG62533
UniProt:
A0A7D5LB30
LinkDB
All DBs
Position
2568750..2569562
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AA seq
270 aa
AA seq
DB search
MADQGSGGEPSSVLRNKRDATRYQILVQIADRQPAVSQQEVADAIGITSQAVSDYLQDLT
EQGAVRKHGRGRYEVTKEGVDWLITRTDELREFTDHVSESVIGQVEIDTALATTDVSEGQ
PVSISMADGVLRAAAGTGGTVTAVAVTDAAAGEDVGVTNFEGVLEYDLGKVTVIAVPQVQ
DGGSRLADADAVAAAAAEHDLVGVAGTEALALARRADVSPDVRFGTPFAVQEAAMKGLDV
LLLATTGEVSSHTNKLVAENISYEVVDAAE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggggagcgggggcgaaccgtcgagcgtcctccggaacaagcgggacgcg
acgcgctatcagatcctcgtccagatcgcggacagacagccggcggtgagccagcaggag
gtcgccgacgccatcggcatcacctcgcaggcggtgagcgactacctgcaggacctcacc
gagcagggggccgtcaggaagcacgggcgcggccgctacgaggtgaccaaggagggcgtc
gactggctcatcacacggaccgacgagctccgcgagttcaccgaccacgtctccgagagc
gtcatcggacaggtcgagatcgacacggcgctcgcgaccaccgacgtctccgagggccaa
ccggtgtcgatatcgatggccgacggcgtcctccgtgcggccgcagggaccggagggacc
gtcaccgccgtcgccgtcaccgacgcggccgcgggcgaggacgtcggcgtcaccaacttc
gagggcgtcctcgagtacgatctgggcaaggtgacggtgatcgcggtcccccaggtccag
gacggcgggagcaggctcgcggacgccgacgcggtcgccgccgccgccgcagagcacgac
ctcgtcggcgtcgcggggaccgaggcgctcgcgctcgcgcgccgcgccgacgtctccccc
gacgtccggttcgggaccccgttcgcggtacaggaggccgcgatgaaggggctcgacgtg
ctcctgctcgcgacgacgggcgaggtgtcctcccacaccaacaagctggtcgcagagaac
atcagctacgaggtcgtcgacgccgcggagtga
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