KEGG   Halorarum salinum: HUG12_12775
Entry
HUG12_12775       CDS       T06744                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
halu  Halorarum salinum
Pathway
halu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:halu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HUG12_12775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:halu03000]
    HUG12_12775
   03021 Transcription machinery [BR:halu03021]
    HUG12_12775
Transcription factors [BR:halu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HUG12_12775
Transcription machinery [BR:halu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HUG12_12775
  RNA polymerase III system
    TFIIIB
     HUG12_12775
  RNA polymerase I system
    SL1/TIF-1B
     HUG12_12775
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: QLG62551
UniProt: A0A7D5LBF3
LinkDB
Position
2586798..2587358
AA seq 186 aa
MTDPADSIEIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFR
SGKIVCTGAKSIADVHDALGIIFEKLRDLSIPVEDDPNITVQNIVSSADLGHQLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDEPDVVILLFGSGKIVITGGKRTDDAEGAVEEIVERIE
SLGLLG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgacggacccggcagactcaatcgagatacagaacgtggtcgcatcgacgggtatcggg
caggaactcgacctggaggcgctggcggaggacctccccggggccgacttcaacccggac
aacttcccggggctcgtgtaccggacccaggaaccgaaagccgccgcactcatcttccga
tcggggaagatcgtctgcaccggcgcgaagagcatcgccgacgtccacgacgcgctcggc
atcatcttcgagaaactgcgtgacctctccatccccgtggaggacgacccgaacatcacc
gtccagaacatcgtctcgtcggccgatctcggccaccagctcaacctcaacgccctcgcg
atcggactggggctcgaggacgtcgagtacgagcccgaacagttccccggactcgtctat
cggatggacgaaccggacgtggtcatcctcctcttcggctcggggaagatcgtgatcacg
ggcggcaagcggaccgacgacgccgagggggccgtcgaggagatcgtcgagcgcatcgag
tcgctgggcctgctcggctga

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