Halorarum salinum: HUG12_16480
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Entry
HUG12_16480 CDS
T06744
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halu
Halorarum salinum
Pathway
halu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HUG12_16480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halu03021
]
HUG12_16480
Transcription machinery [BR:
halu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HUG12_16480
Prokaryotic type
Archaeal type
TFB
HUG12_16480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
HTH_Tnp_ISL3
DUF8106
Motif
Other DBs
NCBI-ProteinID:
QLG63240
UniProt:
A0A7D5QDF3
LinkDB
All DBs
Position
3263464..3264432
Genome browser
AA seq
322 aa
AA seq
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MSEKAHARRQPTEQETAERETTDETLSCPECDGNVIQDEEHGETVCEECGLVIEEDSVDR
GPEWRAFDAAEKDKKSRVGAPTTNTMHDKGLSTNIDWRDQDAYGRSLGSRQRQKMRRLRK
WNERFRTRDSKERNLKQALGEIDRMASALGLPKSVRETASVIYRRALEEDLLPGRSIEGV
ATSCTYAAARMAGVPRSLDEISEVSRVEKDEVARTYRYVVRELKLEVKPADPEQYVPRFA
SALELSDESERRAKQLLKNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVAD
ISEVTIRNRYHELLEAEEGLVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaagcacacgcccgacgacagccaaccgaacaggagaccgccgaacgggag
acgaccgacgagacgctatcgtgccccgagtgcgacggcaacgtcatccaggacgaggag
cacggcgagacggtctgcgaggagtgcggtctcgtcatcgaggaggactccgtcgaccgc
gggcccgagtggcgcgcgttcgacgccgccgagaaggacaagaagagccgcgtcggcgcc
ccgacgacgaacacgatgcacgacaaggggctctcgacgaacatcgactggcgcgaccag
gacgcgtacggccggtcgctcggttcccgccagcgccagaagatgcgacggctccggaag
tggaacgagcggttccggacgcgggactcgaaggagcggaacctgaagcaggcgctcggc
gagatcgaccgcatggccagcgcgctcggcctcccgaagagcgtccgcgagaccgcctca
gtcatctaccgccgcgcgctcgaggaggacctgctgcccggtcgctccatcgagggcgtc
gccacctcctgcacgtacgcggccgcccggatggccggcgttccgcgctcgctcgacgag
atctcggaggtctcccgcgtcgagaaggacgaggtcgcccggacgtaccgctacgtcgtc
cgcgaactgaagctcgaggtgaaacccgccgacccggagcagtacgtcccccggttcgcc
tccgcgctggagctctcggacgagtccgagcgacgcgcgaaacagctgctgaagaacgcc
aaggagaagggcgtccactcgggcaagtcgcccgtggggctcgcggcggccgccgtctac
gccgcggcgcttctcaccaacgagaagacgacccaggcggccgtctccgaggtcgcggac
atctccgaggtcaccatccgcaaccggtaccacgaactgctcgaggccgaggaaggcctc
gtcgcctga
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